Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 Y_RNA.77-201ENST00000362962 107 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 SNORA26.8-201ENST00000391306 124 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 RPS3AP23-201ENST00000401762 784 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 MIR1911-201ENST00000410783 80 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 AC016769.2-201ENST00000414815 475 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 AL161631.1-201ENST00000417933 486 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 AC233728.2-201ENST00000425348 757 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 AC090774.1-201ENST00000435925 246 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 CYCSP43-201ENST00000438233 310 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 AC118469.1-201ENST00000442943 488 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 COX6CP12-201ENST00000446748 202 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 AC239367.2-201ENST00000447309 705 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 AL359073.1-201ENST00000448036 403 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 AL513533.1-201ENST00000453728 415 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 MTCO1P42-201ENST00000457379 726 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 RNA5SP269-201ENST00000459032 137 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 MTCO2P32-201ENST00000514865 403 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 ZNF192P1-203ENST00000565888 810 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 AC060771.1-201ENST00000582031 164 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 RN7SL690P-201ENST00000582087 240 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 AC069061.3-201ENST00000582254 823 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 MIR6780A-201ENST00000615089 68 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 AC100827.5-201ENST00000615883 426 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 U7.8-201ENST00000619968 63 ntBASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PCDHB16Q9NRJ7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 RNA5SP388-201ENST00000362584 119 ntBASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 SNORD116-1-201ENST00000384335 95 ntBASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 HMGN1P24-201ENST00000412282 298 ntBASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 RPL7AP73-201ENST00000413490 353 ntBASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 AC017083.1-201ENST00000428093 483 ntBASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 AC073387.1-201ENST00000453261 709 ntBASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 AC007967.1-201ENST00000455422 1159 ntBASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 RPL23AP31-201ENST00000456160 467 ntBASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 RPL31P3-201ENST00000458430 332 ntBASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 AC010326.1-201ENST00000462726 602 ntBASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 RPS4XP13-201ENST00000483219 789 ntBASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 AC116347.2-201ENST00000514912 523 ntBASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 AC012065.4-201ENST00000602445 679 ntBASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 AL160290.3-201ENST00000604869 165 ntBASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 AC024940.4-201ENST00000605507 246 ntBASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 AC012603.1-201ENST00000606424 528 ntBASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 AC019193.2-201ENST00000610012 634 ntBASIC3.74□□□□□ -1.81
PCDHB16Q9NRJ7 AC138749.5-201ENST00000611461 208 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms