Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC090740.1-201ENST00000623193 2262 ntBASIC7.57□□□□□ -1.2
RTN4Q9NQC3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
RTN4Q9NQC3 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RTN4Q9NQC3 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC7.57□□□□□ -1.2
RTN4Q9NQC3 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RTN4Q9NQC3 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RTN4Q9NQC3 UBE2V1P14-201ENST00000415815 558 ntBASIC7.57□□□□□ -1.2
RTN4Q9NQC3 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.57□□□□□ -1.2
RTN4Q9NQC3 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.57□□□□□ -1.2
RTN4Q9NQC3 MTCYBP9-201ENST00000431021 303 ntBASIC7.57□□□□□ -1.2
RTN4Q9NQC3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC7.57□□□□□ -1.2
RTN4Q9NQC3 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC7.57□□□□□ -1.2
RTN4Q9NQC3 RN7SL308P-201ENST00000464971 297 ntBASIC7.57□□□□□ -1.2
RTN4Q9NQC3 FTH1P2-201ENST00000466086 412 ntBASIC7.57□□□□□ -1.2
RTN4Q9NQC3 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC7.57□□□□□ -1.2
RTN4Q9NQC3 RN7SL228P-201ENST00000470060 303 ntBASIC7.57□□□□□ -1.2
RTN4Q9NQC3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC7.57□□□□□ -1.2
RTN4Q9NQC3 AC083982.1-201ENST00000485679 344 ntBASIC7.57□□□□□ -1.2
RTN4Q9NQC3 AC012339.2-201ENST00000523996 453 ntBASIC7.57□□□□□ -1.2
RTN4Q9NQC3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC7.57□□□□□ -1.2
RTN4Q9NQC3 AL359219.2-201ENST00000555184 348 ntBASIC7.57□□□□□ -1.2
RTN4Q9NQC3 AL049839.1-201ENST00000556151 657 ntBASIC7.57□□□□□ -1.2
RTN4Q9NQC3 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC7.57□□□□□ -1.2
RTN4Q9NQC3 SCARNA4-202ENST00000625402 129 ntBASIC7.57□□□□□ -1.2
RTN4Q9NQC3 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC7.57□□□□□ -1.2
RTN4Q9NQC3 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RTN4Q9NQC3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC7.56□□□□□ -1.2
RTN4Q9NQC3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RTN4Q9NQC3 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RTN4Q9NQC3 RNU1-108P-201ENST00000362556 161 ntBASIC7.56□□□□□ -1.2
RTN4Q9NQC3 Y_RNA.176-201ENST00000363815 109 ntBASIC7.56□□□□□ -1.2
RTN4Q9NQC3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC7.56□□□□□ -1.2
RTN4Q9NQC3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC7.56□□□□□ -1.2
RTN4Q9NQC3 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
RTN4Q9NQC3 RNU6-101P-201ENST00000410323 104 ntBASIC7.56□□□□□ -1.2
RTN4Q9NQC3 RN7SKP126-201ENST00000411143 300 ntBASIC7.56□□□□□ -1.2
RTN4Q9NQC3 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC7.56□□□□□ -1.2
RTN4Q9NQC3 AC096644.2-201ENST00000429278 159 ntBASIC7.56□□□□□ -1.2
RTN4Q9NQC3 AC124916.1-201ENST00000444020 547 ntBASIC7.56□□□□□ -1.2
RTN4Q9NQC3 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.56□□□□□ -1.2
RTN4Q9NQC3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC7.56□□□□□ -1.2
RTN4Q9NQC3 RPLP0P1-201ENST00000457002 361 ntBASIC7.56□□□□□ -1.2
RTN4Q9NQC3 RPL23AP24-201ENST00000458203 385 ntBASIC7.56□□□□□ -1.2
RTN4Q9NQC3 AC083806.1-201ENST00000468934 316 ntBASIC7.56□□□□□ -1.2
RTN4Q9NQC3 RPL7P17-201ENST00000470927 724 ntBASIC7.56□□□□□ -1.2
RTN4Q9NQC3 AC091982.1-202ENST00000473923 343 ntBASIC7.56□□□□□ -1.2
RTN4Q9NQC3 RN7SL282P-201ENST00000479676 297 ntBASIC7.56□□□□□ -1.2
RTN4Q9NQC3 RN7SL143P-201ENST00000496780 297 ntBASIC7.56□□□□□ -1.2
RTN4Q9NQC3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC7.56□□□□□ -1.2
RTN4Q9NQC3 AC016559.1-201ENST00000511420 199 ntBASIC7.56□□□□□ -1.2
RTN4Q9NQC3 RPA2P1-201ENST00000556557 721 ntBASIC7.56□□□□□ -1.2
RTN4Q9NQC3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC7.56□□□□□ -1.2
RTN4Q9NQC3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC7.56□□□□□ -1.2
RTN4Q9NQC3 AL049829.3-202ENST00000604278 711 ntBASIC7.56□□□□□ -1.2
RTN4Q9NQC3 AC136601.2-201ENST00000604356 474 ntBASIC7.56□□□□□ -1.2
RTN4Q9NQC3 AC004805.2-201ENST00000605382 482 ntBASIC7.56□□□□□ -1.2
RTN4Q9NQC3 PRR13P7-201ENST00000605538 430 ntBASIC7.56□□□□□ -1.2
RTN4Q9NQC3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC7.56□□□□□ -1.2
RTN4Q9NQC3 AL606534.2-204ENST00000635008 178 ntBASIC7.56□□□□□ -1.2
RTN4Q9NQC3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RTN4Q9NQC3 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC7.56□□□□□ -1.2
RTN4Q9NQC3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC7.56□□□□□ -1.2
RTN4Q9NQC3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RTN4Q9NQC3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC7.56□□□□□ -1.2
RTN4Q9NQC3 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
RTN4Q9NQC3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC7.56□□□□□ -1.2
RTN4Q9NQC3 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
RTN4Q9NQC3 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RTN4Q9NQC3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
RTN4Q9NQC3 AC063976.2-201ENST00000425667 3556 ntBASIC7.55□□□□□ -1.2
RTN4Q9NQC3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RTN4Q9NQC3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
RTN4Q9NQC3 A2MP1-204ENST00000566278 4130 ntBASIC7.55□□□□□ -1.2
RTN4Q9NQC3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RTN4Q9NQC3 Y_RNA.152-201ENST00000363578 100 ntBASIC7.55□□□□□ -1.2
RTN4Q9NQC3 Y_RNA.496-201ENST00000384444 101 ntBASIC7.55□□□□□ -1.2
RTN4Q9NQC3 MIR323B-201ENST00000385269 82 ntBASIC7.55□□□□□ -1.2
RTN4Q9NQC3 MIR548F4-201ENST00000408515 105 ntBASIC7.55□□□□□ -1.2
RTN4Q9NQC3 AC011933.1-201ENST00000413334 321 ntBASIC7.55□□□□□ -1.2
RTN4Q9NQC3 AL354766.1-201ENST00000423396 542 ntBASIC7.55□□□□□ -1.2
RTN4Q9NQC3 AC092047.1-201ENST00000424997 240 ntBASIC7.55□□□□□ -1.2
RTN4Q9NQC3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC7.55□□□□□ -1.2
RTN4Q9NQC3 AL121776.1-201ENST00000429337 372 ntBASIC7.55□□□□□ -1.2
RTN4Q9NQC3 IPO7P1-201ENST00000442031 636 ntBASIC7.55□□□□□ -1.2
RTN4Q9NQC3 DBIL5P2-201ENST00000443827 253 ntBASIC7.55□□□□□ -1.2
RTN4Q9NQC3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RTN4Q9NQC3 BX323845.2-201ENST00000458382 234 ntBASIC7.55□□□□□ -1.2
RTN4Q9NQC3 AC008620.1-201ENST00000468453 592 ntBASIC7.55□□□□□ -1.2
RTN4Q9NQC3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
RTN4Q9NQC3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC7.55□□□□□ -1.2
RTN4Q9NQC3 RNU6-572P-201ENST00000516724 80 ntBASIC7.55□□□□□ -1.2
RTN4Q9NQC3 AP002404.1-201ENST00000532005 451 ntBASIC7.55□□□□□ -1.2
RTN4Q9NQC3 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC7.55□□□□□ -1.2
RTN4Q9NQC3 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.55□□□□□ -1.2
RTN4Q9NQC3 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.55□□□□□ -1.2
RTN4Q9NQC3 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC7.55□□□□□ -1.2
RTN4Q9NQC3 AL031846.1-201ENST00000560933 314 ntBASIC7.55□□□□□ -1.2
RTN4Q9NQC3 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC7.55□□□□□ -1.2
RTN4Q9NQC3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC7.55□□□□□ -1.2
RTN4Q9NQC3 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms