Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.88□□□□□ -1.63
VTA1Q9NP79 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.88□□□□□ -1.63
VTA1Q9NP79 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.88□□□□□ -1.63
VTA1Q9NP79 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.88□□□□□ -1.63
VTA1Q9NP79 AC011460.1-201ENST00000636268 1834 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.88□□□□□ -1.63
VTA1Q9NP79 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
VTA1Q9NP79 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
VTA1Q9NP79 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 GNG5P1-201ENST00000255500 204 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 OR4G2P-201ENST00000328113 903 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 RNA5SP151-201ENST00000365632 117 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 RNU6-356P-201ENST00000384140 107 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 RNU6-821P-201ENST00000390995 107 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 RNA5SP36-201ENST00000410197 133 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 RPL36AP10-201ENST00000421785 322 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 AC006548.1-201ENST00000427470 102 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 COX6B1P7-201ENST00000430845 235 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 RPS26P2-201ENST00000440331 348 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 AC112653.1-201ENST00000443851 386 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VTA1Q9NP79 AL590399.6-201ENST00000446396 307 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 SNORD121B-201ENST00000458838 81 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 RPL7P15-201ENST00000461190 712 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 RPL35AP15-201ENST00000468042 339 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 AC022616.6-201ENST00000520479 119 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 AC087883.1-201ENST00000551882 391 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 SETP7-201ENST00000552169 453 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 AC010680.4-201ENST00000605334 543 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 MIR6867-201ENST00000610636 67 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 MIR8069-1-201ENST00000616627 86 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 U73479.1-201ENST00000618062 168 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 MIR8069-2-201ENST00000621412 86 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 CR381572.1-201ENST00000625098 102 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VTA1Q9NP79 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VTA1Q9NP79 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VTA1Q9NP79 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VTA1Q9NP79 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
VTA1Q9NP79 MTND5P33-201ENST00000571250 1450 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 AC090337.1-201ENST00000579651 2074 ntBASIC4.87□□□□□ -1.63
VTA1Q9NP79 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VTA1Q9NP79 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VTA1Q9NP79 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
VTA1Q9NP79 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VTA1Q9NP79 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VTA1Q9NP79 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.86□□□□□ -1.63
VTA1Q9NP79 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VTA1Q9NP79 MIR372-201ENST00000362225 67 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 U8.3-201ENST00000363321 132 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 RN7SKP226-201ENST00000364912 300 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 Y_RNA.296-201ENST00000364930 108 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 RPL32P23-201ENST00000397237 405 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.86□□□□□ -1.63
VTA1Q9NP79 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.86□□□□□ -1.63
VTA1Q9NP79 RPL36AP36-201ENST00000418616 301 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.86□□□□□ -1.63
VTA1Q9NP79 EIF1P3-201ENST00000423841 334 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.86□□□□□ -1.63
VTA1Q9NP79 MTCYBP45-201ENST00000435243 565 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 AL136380.1-201ENST00000447970 162 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 AL353691.1-201ENST00000451332 387 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.86□□□□□ -1.63
VTA1Q9NP79 RPL23AP81-201ENST00000455252 467 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.86□□□□□ -1.63
VTA1Q9NP79 MTND1P3-201ENST00000484956 952 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 RPL9P6-201ENST00000492764 598 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.86□□□□□ -1.63
VTA1Q9NP79 HMGB1P29-201ENST00000505659 499 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.86□□□□□ -1.63
VTA1Q9NP79 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.86□□□□□ -1.63
VTA1Q9NP79 NPM1P41-201ENST00000512920 831 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 RN7SKP46-201ENST00000515942 234 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 RNU2-46P-201ENST00000517038 113 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms