Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
TRIM4Q9C037 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM4Q9C037 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TRIM4Q9C037 AC010733.2-201ENST00000589496 5702 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.84□□□□□ -1.95
TRIM4Q9C037 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TRIM4Q9C037 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.84□□□□□ -1.95
TRIM4Q9C037 RNU1-138P-201ENST00000384093 164 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 SNORD15B-201ENST00000384714 146 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TRIM4Q9C037 RN7SKP220-201ENST00000410611 288 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.84□□□□□ -1.95
TRIM4Q9C037 NUP35P2-201ENST00000416748 943 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 TOMM22P1-201ENST00000418578 312 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM4Q9C037 PSMA2P3-201ENST00000429685 675 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.84□□□□□ -1.95
TRIM4Q9C037 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM4Q9C037 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 AC103975.1-201ENST00000482506 483 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 HMGB1P38-201ENST00000490557 577 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 ANXA2P1-201ENST00000505539 926 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
TRIM4Q9C037 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.84□□□□□ -1.95
TRIM4Q9C037 AP002812.4-201ENST00000532139 286 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 ATP5F1P7-201ENST00000567330 760 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM4Q9C037 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.84□□□□□ -1.95
TRIM4Q9C037 ZNF92P3-201ENST00000596594 954 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 DUXAP3-201ENST00000603616 594 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 HSPE1P14-201ENST00000605812 302 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 AL162574.2-201ENST00000614618 657 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 Z99129.2-201ENST00000619967 314 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 FRG1DP-201ENST00000635586 771 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 FAM157B-203ENST00000639350 358 ntBASIC2.84□□□□□ -1.95
TRIM4Q9C037 AL049737.1-201ENST00000413920 1403 ntBASIC2.84□□□□□ -1.96
TRIM4Q9C037 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM4Q9C037 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.83□□□□□ -1.96
TRIM4Q9C037 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
TRIM4Q9C037 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM4Q9C037 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.83□□□□□ -1.96
TRIM4Q9C037 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM4Q9C037 AL672167.1-206ENST00000356293 943 ntBASIC2.83□□□□□ -1.96
TRIM4Q9C037 RNA5SP393-201ENST00000363423 117 ntBASIC2.83□□□□□ -1.96
TRIM4Q9C037 DEFA7P-201ENST00000382676 285 ntBASIC2.83□□□□□ -1.96
TRIM4Q9C037 MIR196B-201ENST00000384852 84 ntBASIC2.83□□□□□ -1.96
TRIM4Q9C037 RNU6-1077P-201ENST00000410506 102 ntBASIC2.83□□□□□ -1.96
TRIM4Q9C037 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM4Q9C037 AC073310.1-201ENST00000423226 1033 ntBASIC2.83□□□□□ -1.96
TRIM4Q9C037 OR51AB1P-201ENST00000429046 620 ntBASIC2.83□□□□□ -1.96
TRIM4Q9C037 MTCO3P17-201ENST00000443775 513 ntBASIC2.83□□□□□ -1.96
TRIM4Q9C037 RPL37P4-201ENST00000448908 268 ntBASIC2.83□□□□□ -1.96
TRIM4Q9C037 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM4Q9C037 AC117440.1-201ENST00000474107 571 ntBASIC2.83□□□□□ -1.96
TRIM4Q9C037 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM4Q9C037 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.83□□□□□ -1.96
TRIM4Q9C037 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.83□□□□□ -1.96
TRIM4Q9C037 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM4Q9C037 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM4Q9C037 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM4Q9C037 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM4Q9C037 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.82□□□□□ -1.96
TRIM4Q9C037 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.82□□□□□ -1.96
TRIM4Q9C037 ZNF271P-202ENST00000465539 1970 ntBASIC2.82□□□□□ -1.96
TRIM4Q9C037 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
TRIM4Q9C037 XGY1-201ENST00000381172 446 ntBASIC2.82□□□□□ -1.96
TRIM4Q9C037 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TRIM4Q9C037 RNU6-1293P-201ENST00000384077 107 ntBASIC2.82□□□□□ -1.96
TRIM4Q9C037 SNORA18.3-201ENST00000384122 132 ntBASIC2.82□□□□□ -1.96
TRIM4Q9C037 RPL7P25-201ENST00000404151 721 ntBASIC2.82□□□□□ -1.96
TRIM4Q9C037 AL138880.1-201ENST00000405824 642 ntBASIC2.82□□□□□ -1.96
TRIM4Q9C037 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM4Q9C037 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.82□□□□□ -1.96
TRIM4Q9C037 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.82□□□□□ -1.96
TRIM4Q9C037 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM4Q9C037 TPTE2P6-202ENST00000445572 1007 ntBASIC2.82□□□□□ -1.96
TRIM4Q9C037 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM4Q9C037 AL513343.1-201ENST00000451818 792 ntBASIC2.82□□□□□ -1.96
TRIM4Q9C037 AP000852.1-201ENST00000472460 573 ntBASIC2.82□□□□□ -1.96
TRIM4Q9C037 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.82□□□□□ -1.96
TRIM4Q9C037 HMGB1P3-201ENST00000502802 616 ntBASIC2.82□□□□□ -1.96
TRIM4Q9C037 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
TRIM4Q9C037 RNU1-41P-201ENST00000516161 162 ntBASIC2.82□□□□□ -1.96
TRIM4Q9C037 RNU1-48P-201ENST00000516400 162 ntBASIC2.82□□□□□ -1.96
TRIM4Q9C037 AC009097.3-201ENST00000563557 1018 ntBASIC2.82□□□□□ -1.96
TRIM4Q9C037 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.82□□□□□ -1.96
TRIM4Q9C037 AC098826.3-201ENST00000603823 466 ntBASIC2.82□□□□□ -1.96
TRIM4Q9C037 RNU6-156P-201ENST00000621869 107 ntBASIC2.82□□□□□ -1.96
TRIM4Q9C037 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.82□□□□□ -1.96
TRIM4Q9C037 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
TRIM4Q9C037 RNU6-386P-201ENST00000362650 107 ntBASIC2.81□□□□□ -1.96
TRIM4Q9C037 RNU6-335P-201ENST00000364563 113 ntBASIC2.81□□□□□ -1.96
TRIM4Q9C037 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM4Q9C037 MIR592-201ENST00000384959 97 ntBASIC2.81□□□□□ -1.96
TRIM4Q9C037 RNA5SP247-201ENST00000411181 105 ntBASIC2.81□□□□□ -1.96
TRIM4Q9C037 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.81□□□□□ -1.96
TRIM4Q9C037 ARL5AP3-201ENST00000439327 386 ntBASIC2.81□□□□□ -1.96
TRIM4Q9C037 Z99714.1-201ENST00000450463 807 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms