Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 GSTA11P-201ENST00000452866 669 ntBASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 HMGB1P25-201ENST00000468402 607 ntBASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 RN7SL499P-201ENST00000481141 276 ntBASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 RPL23AP55-201ENST00000498163 452 ntBASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 AC008494.2-201ENST00000514544 370 ntBASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 MTCO2P32-201ENST00000514865 403 ntBASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 EEF1A1P37-201ENST00000522748 715 ntBASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 AC004923.2-201ENST00000529649 369 ntBASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 AC007954.1-201ENST00000554198 494 ntBASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 VN1R78P-201ENST00000597393 564 ntBASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 AC110792.4-201ENST00000609843 298 ntBASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 AC004925.1-201ENST00000624256 2706 ntBASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
UPF3BQ9BZI7 AC092447.7-201ENST00000422212 1621 ntBASIC3.22□□□□□ -1.89
UPF3BQ9BZI7 AL031679.1-201ENST00000400616 525 ntBASIC3.22□□□□□ -1.89
UPF3BQ9BZI7 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
UPF3BQ9BZI7 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.22□□□□□ -1.89
UPF3BQ9BZI7 AC025459.1-201ENST00000504072 156 ntBASIC3.22□□□□□ -1.89
UPF3BQ9BZI7 ARL4AP2-201ENST00000507378 601 ntBASIC3.22□□□□□ -1.89
UPF3BQ9BZI7 AC104986.1-201ENST00000517978 436 ntBASIC3.22□□□□□ -1.89
UPF3BQ9BZI7 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.22□□□□□ -1.89
UPF3BQ9BZI7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.22□□□□□ -1.89
UPF3BQ9BZI7 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.22□□□□□ -1.89
UPF3BQ9BZI7 AC009097.3-201ENST00000563557 1018 ntBASIC3.22□□□□□ -1.89
UPF3BQ9BZI7 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.22□□□□□ -1.89
UPF3BQ9BZI7 AC090751.1-201ENST00000566966 267 ntBASIC3.22□□□□□ -1.89
UPF3BQ9BZI7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.22□□□□□ -1.89
UPF3BQ9BZI7 VIS1.1-201ENST00000610517 203 ntBASIC3.22□□□□□ -1.89
UPF3BQ9BZI7 AL390240.1-201ENST00000612950 384 ntBASIC3.22□□□□□ -1.89
UPF3BQ9BZI7 AC231759.1-201ENST00000616455 597 ntBASIC3.22□□□□□ -1.89
UPF3BQ9BZI7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.22□□□□□ -1.89
UPF3BQ9BZI7 AC046144.1-201ENST00000478559 1853 ntBASIC3.22□□□□□ -1.89
UPF3BQ9BZI7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
UPF3BQ9BZI7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 MIR196B-201ENST00000384852 84 ntBASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 AL138827.1-201ENST00000402666 306 ntBASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 AL645937.1-202ENST00000421799 937 ntBASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 SSXP4-201ENST00000451349 245 ntBASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 CACYBPP2-201ENST00000453625 678 ntBASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 snoU13.26-201ENST00000459452 105 ntBASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 AC104687.1-201ENST00000485829 412 ntBASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 FABP5P6-201ENST00000510588 409 ntBASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 RNU1-61P-201ENST00000516107 151 ntBASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 AC010306.1-201ENST00000523223 1117 ntBASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 AF279873.1-201ENST00000523393 313 ntBASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 AC002076.2-201ENST00000617362 122 ntBASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 U73479.1-201ENST00000618062 168 ntBASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
UPF3BQ9BZI7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 AC073055.1-201ENST00000456901 1621 ntBASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 RNU6-819P-201ENST00000364116 107 ntBASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 TOMM20P4-201ENST00000427861 435 ntBASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 MRPS33P4-201ENST00000434892 317 ntBASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 AC126389.1-201ENST00000477436 290 ntBASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 AL024509.2-201ENST00000493462 493 ntBASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 AC117522.3-201ENST00000507974 584 ntBASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 ELOCP31-201ENST00000540463 467 ntBASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 AP003717.3-201ENST00000544832 1180 ntBASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 AC074029.2-201ENST00000551045 634 ntBASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 MTCO3P24-201ENST00000572729 782 ntBASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 VN1R90P-201ENST00000595717 726 ntBASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 AL109653.1-201ENST00000603091 248 ntBASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 AL590282.1-201ENST00000610379 1136 ntBASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 AL590808.1-201ENST00000618696 141 ntBASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 AC020923.1-201ENST00000624021 917 ntBASIC3.2□□□□□ -1.9
UPF3BQ9BZI7 ZNF37BP-203ENST00000452306 1352 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms