Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.82□□□□□ -1.96
FOXC2Q99958 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
FOXC2Q99958 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.82□□□□□ -1.96
FOXC2Q99958 AC105914.1-201ENST00000511798 226 ntBASIC2.82□□□□□ -1.96
FOXC2Q99958 RNA5SP135-201ENST00000517019 125 ntBASIC2.82□□□□□ -1.96
FOXC2Q99958 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.82□□□□□ -1.96
FOXC2Q99958 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.82□□□□□ -1.96
FOXC2Q99958 AC092451.2-201ENST00000538746 658 ntBASIC2.82□□□□□ -1.96
FOXC2Q99958 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.82□□□□□ -1.96
FOXC2Q99958 H3F3AP1-201ENST00000559984 334 ntBASIC2.82□□□□□ -1.96
FOXC2Q99958 CYP2C60P-201ENST00000566088 139 ntBASIC2.82□□□□□ -1.96
FOXC2Q99958 AC098483.2-201ENST00000603158 454 ntBASIC2.82□□□□□ -1.96
FOXC2Q99958 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.82□□□□□ -1.96
FOXC2Q99958 AC138932.5-201ENST00000617759 563 ntBASIC2.82□□□□□ -1.96
FOXC2Q99958 AC253576.2-201ENST00000618815 580 ntBASIC2.82□□□□□ -1.96
FOXC2Q99958 AL360181.4-201ENST00000621752 134 ntBASIC2.82□□□□□ -1.96
FOXC2Q99958 AC127502.3-201ENST00000636170 1206 ntBASIC2.82□□□□□ -1.96
FOXC2Q99958 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
FOXC2Q99958 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
FOXC2Q99958 AC080100.1-201ENST00000624239 5356 ntBASIC2.82□□□□□ -1.96
FOXC2Q99958 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.81□□□□□ -1.96
FOXC2Q99958 AF117829.1-206ENST00000621883 3802 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
FOXC2Q99958 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
FOXC2Q99958 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
FOXC2Q99958 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
FOXC2Q99958 U6.112-201ENST00000384129 70 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 AL391417.1-201ENST00000404100 426 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 RNU6-712P-201ENST00000410558 100 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.81□□□□□ -1.96
FOXC2Q99958 YPEL5P1-201ENST00000419731 367 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 SFR1P2-201ENST00000421841 730 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.81□□□□□ -1.96
FOXC2Q99958 AC005345.1-201ENST00000431868 217 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.81□□□□□ -1.96
FOXC2Q99958 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.81□□□□□ -1.96
FOXC2Q99958 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.81□□□□□ -1.96
FOXC2Q99958 AL158053.1-201ENST00000441503 453 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 MOB1AP2-201ENST00000446060 614 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 AL096829.2-201ENST00000446582 742 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.81□□□□□ -1.96
FOXC2Q99958 RN7SL863P-201ENST00000462370 296 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 RPL23AP14-201ENST00000468281 468 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 AC096751.1-202ENST00000502691 1067 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 MTCO2P9-201ENST00000503214 694 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.81□□□□□ -1.96
FOXC2Q99958 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
FOXC2Q99958 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.81□□□□□ -1.96
FOXC2Q99958 AC103783.1-201ENST00000520506 373 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.81□□□□□ -1.96
FOXC2Q99958 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
FOXC2Q99958 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.81□□□□□ -1.96
FOXC2Q99958 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
FOXC2Q99958 HIGD1AP1-201ENST00000550979 275 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.81□□□□□ -1.96
FOXC2Q99958 MIR4789-201ENST00000577469 82 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 AC026741.1-201ENST00000605892 482 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.81□□□□□ -1.96
FOXC2Q99958 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC2.81□□□□□ -1.96
FOXC2Q99958 AC111188.2-201ENST00000529697 1387 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
FOXC2Q99958 RIOK3P1-201ENST00000418778 1528 ntBASIC2.81□□□□□ -1.96
FOXC2Q99958 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
FOXC2Q99958 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
FOXC2Q99958 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
FOXC2Q99958 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
FOXC2Q99958 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
FOXC2Q99958 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
FOXC2Q99958 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
FOXC2Q99958 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.8□□□□□ -1.96
FOXC2Q99958 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.8□□□□□ -1.96
FOXC2Q99958 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
FOXC2Q99958 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
FOXC2Q99958 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
FOXC2Q99958 SNORD82-201ENST00000365530 70 ntBASIC2.8□□□□□ -1.96
FOXC2Q99958 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
FOXC2Q99958 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.8□□□□□ -1.96
FOXC2Q99958 AC063979.1-201ENST00000415539 377 ntBASIC2.8□□□□□ -1.96
FOXC2Q99958 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.8□□□□□ -1.96
FOXC2Q99958 AC099677.1-201ENST00000420575 175 ntBASIC2.8□□□□□ -1.96
FOXC2Q99958 MTCO2P1-201ENST00000424648 477 ntBASIC2.8□□□□□ -1.96
FOXC2Q99958 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.8□□□□□ -1.96
FOXC2Q99958 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.8□□□□□ -1.96
FOXC2Q99958 AC104308.1-201ENST00000454621 333 ntBASIC2.8□□□□□ -1.96
FOXC2Q99958 HMGB1P25-201ENST00000468402 607 ntBASIC2.8□□□□□ -1.96
FOXC2Q99958 VN1R104P-201ENST00000505115 1009 ntBASIC2.8□□□□□ -1.96
FOXC2Q99958 AC112198.1-201ENST00000505369 1220 ntBASIC2.8□□□□□ -1.96
FOXC2Q99958 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.8□□□□□ -1.96
FOXC2Q99958 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.8□□□□□ -1.96
FOXC2Q99958 SNORA31.8-201ENST00000516327 108 ntBASIC2.8□□□□□ -1.96
FOXC2Q99958 IGHV3-76-201ENST00000522465 295 ntBASIC2.8□□□□□ -1.96
FOXC2Q99958 AC126177.3-201ENST00000551839 688 ntBASIC2.8□□□□□ -1.96
FOXC2Q99958 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.8□□□□□ -1.96
FOXC2Q99958 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.8□□□□□ -1.96
FOXC2Q99958 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.8□□□□□ -1.96
FOXC2Q99958 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.8□□□□□ -1.96
FOXC2Q99958 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.8□□□□□ -1.96
FOXC2Q99958 AL162713.1-201ENST00000604480 262 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms