Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC106785.1-201ENST00000565935 262 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 AC012417.1-201ENST00000582307 1039 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.29□□□□□ -1.88
SSX3Q99909 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.29□□□□□ -1.88
SSX3Q99909 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.29□□□□□ -1.88
SSX3Q99909 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.29□□□□□ -1.88
SSX3Q99909 AC022916.3-201ENST00000592961 742 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.29□□□□□ -1.88
SSX3Q99909 AL391001.1-201ENST00000602747 715 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 AL606490.9-201ENST00000603331 271 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 AL022099.1-201ENST00000604551 712 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 AC092106.3-201ENST00000611308 722 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 AC002076.2-201ENST00000617362 122 ntBASIC3.29□□□□□ -1.88
SSX3Q99909 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SSX3Q99909 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSX3Q99909 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.29□□□□□ -1.88
SSX3Q99909 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.29□□□□□ -1.88
SSX3Q99909 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSX3Q99909 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SSX3Q99909 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.29□□□□□ -1.88
SSX3Q99909 AC118273.1-201ENST00000525324 3006 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 AL079305.1-201ENST00000623159 3008 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SSX3Q99909 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.28□□□□□ -1.88
SSX3Q99909 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SSX3Q99909 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SSX3Q99909 RPL23AP57-201ENST00000332361 466 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 FAM133CP-201ENST00000332869 704 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 RNU6-173P-201ENST00000364215 104 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.28□□□□□ -1.88
SSX3Q99909 SNORA48.8-201ENST00000391324 134 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 ATP5F1P4-201ENST00000397288 746 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 AL445189.1-201ENST00000405722 338 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 RNU2-47P-201ENST00000410649 186 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 RNU4-6P-201ENST00000410804 122 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 RN7SKP53-201ENST00000411337 315 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.28□□□□□ -1.88
SSX3Q99909 MTCO2P5-201ENST00000422621 426 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 MTCO2P17-201ENST00000424336 677 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 OR8F1P-201ENST00000425243 930 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 AC233728.2-201ENST00000425348 757 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 AC007742.1-201ENST00000425789 329 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 SNRPEP4-201ENST00000435815 279 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 ELOCP26-201ENST00000436067 329 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.28□□□□□ -1.88
SSX3Q99909 Z82190.1-201ENST00000454534 490 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.28□□□□□ -1.88
SSX3Q99909 RNU7-136P-201ENST00000458819 69 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.28□□□□□ -1.88
SSX3Q99909 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.28□□□□□ -1.88
SSX3Q99909 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.28□□□□□ -1.88
SSX3Q99909 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SSX3Q99909 AC010460.1-201ENST00000507087 466 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.28□□□□□ -1.88
SSX3Q99909 ARL2BPP6-201ENST00000512757 439 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 RNU6-150P-201ENST00000516237 95 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
SSX3Q99909 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.28□□□□□ -1.88
SSX3Q99909 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SSX3Q99909 AC008011.1-201ENST00000545989 227 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 CYCSP2-201ENST00000558168 301 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.28□□□□□ -1.88
SSX3Q99909 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.28□□□□□ -1.88
SSX3Q99909 AC007599.1-201ENST00000568688 1174 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 AC053481.4-201ENST00000583164 216 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 MIR5684-201ENST00000585074 65 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 AC093227.2-201ENST00000589357 285 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 VN1R82P-201ENST00000601481 356 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 SNORA51-201ENST00000606420 132 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.28□□□□□ -1.88
SSX3Q99909 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.28□□□□□ -1.88
SSX3Q99909 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.28□□□□□ -1.88
SSX3Q99909 MIR7151-201ENST00000617477 60 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SSX3Q99909 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SSX3Q99909 AC006504.1-201ENST00000562493 3666 ntBASIC3.28□□□□□ -1.88
SSX3Q99909 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SSX3Q99909 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
SSX3Q99909 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
SSX3Q99909 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.27□□□□□ -1.89
SSX3Q99909 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.27□□□□□ -1.89
SSX3Q99909 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.27□□□□□ -1.89
SSX3Q99909 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSX3Q99909 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SSX3Q99909 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SSX3Q99909 MIR493-201ENST00000385254 89 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 RNU6-757P-201ENST00000410334 100 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 RPS3AP25-201ENST00000411660 793 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 TPMTP2-201ENST00000414372 726 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 AL008987.1-201ENST00000415528 237 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 RPL21P32-201ENST00000419877 477 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 RPL7P30-201ENST00000420888 709 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 RPL31P12-201ENST00000422587 358 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 AL358472.1-201ENST00000431295 329 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.27□□□□□ -1.89
SSX3Q99909 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.27□□□□□ -1.89
SSX3Q99909 AC104090.1-201ENST00000506341 1171 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.27□□□□□ -1.89
SSX3Q99909 AC034244.1-201ENST00000507687 207 ntBASIC3.27□□□□□ -1.89
SSX3Q99909 FTH1P21-201ENST00000512179 511 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms