Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 VN1R78P-201ENST00000597393 564 ntBASIC3.63□□□□□ -1.83
CDCA3Q99618 AC124312.4-201ENST00000605533 310 ntBASIC3.63□□□□□ -1.83
CDCA3Q99618 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.63□□□□□ -1.83
CDCA3Q99618 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.63□□□□□ -1.83
CDCA3Q99618 AL355493.4-201ENST00000618530 292 ntBASIC3.63□□□□□ -1.83
CDCA3Q99618 MIR4278-201ENST00000636094 69 ntBASIC3.63□□□□□ -1.83
CDCA3Q99618 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.63□□□□□ -1.83
CDCA3Q99618 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDCA3Q99618 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.63□□□□□ -1.83
CDCA3Q99618 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
CDCA3Q99618 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDCA3Q99618 AP001486.2-201ENST00000561652 5113 ntBASIC3.63□□□□□ -1.83
CDCA3Q99618 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDCA3Q99618 USP8P1-201ENST00000494673 3183 ntBASIC3.63□□□□□ -1.83
CDCA3Q99618 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.63□□□□□ -1.83
CDCA3Q99618 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CDCA3Q99618 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDCA3Q99618 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CDCA3Q99618 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CDCA3Q99618 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDCA3Q99618 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDCA3Q99618 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDCA3Q99618 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDCA3Q99618 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.62□□□□□ -1.83
CDCA3Q99618 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDCA3Q99618 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDCA3Q99618 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDCA3Q99618 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDCA3Q99618 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDCA3Q99618 SNRPEP2-201ENST00000397592 279 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 AL450338.1-201ENST00000407987 512 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 MTCO2P21-201ENST00000419780 677 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 AL139421.1-201ENST00000423010 169 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 MTND3P1-201ENST00000441336 220 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDCA3Q99618 Z75741.1-201ENST00000446793 314 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 VN1R10P-201ENST00000447106 875 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.62□□□□□ -1.83
CDCA3Q99618 RSL24D1P3-201ENST00000449255 495 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 HMGB3P22-202ENST00000451823 572 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.62□□□□□ -1.83
CDCA3Q99618 TRBV26-201ENST00000456572 344 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 RPL7P47-201ENST00000497299 556 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.62□□□□□ -1.83
CDCA3Q99618 MTCYBP35-201ENST00000503630 1137 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 AC098862.1-201ENST00000504991 413 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.62□□□□□ -1.83
CDCA3Q99618 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.62□□□□□ -1.83
CDCA3Q99618 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.62□□□□□ -1.83
CDCA3Q99618 IGKV2D-36-201ENST00000518643 226 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.62□□□□□ -1.83
CDCA3Q99618 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.62□□□□□ -1.83
CDCA3Q99618 OR8L1P-201ENST00000534005 955 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.62□□□□□ -1.83
CDCA3Q99618 CENPUP2-201ENST00000555897 1186 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 OR4K7P-201ENST00000580232 945 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.62□□□□□ -1.83
CDCA3Q99618 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.62□□□□□ -1.83
CDCA3Q99618 AL451007.1-201ENST00000595491 289 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 AC245036.5-201ENST00000596330 847 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 AC025588.3-201ENST00000604182 274 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 AL034351.1-201ENST00000605288 668 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 AL158042.1-201ENST00000605338 460 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 AC073657.2-201ENST00000605661 303 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 AL354976.1-201ENST00000613843 387 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 AC231759.1-201ENST00000616455 597 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 AC008147.4-201ENST00000617570 1204 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 AP000484.1-201ENST00000620067 1252 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.62□□□□□ -1.83
CDCA3Q99618 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.62□□□□□ -1.83
CDCA3Q99618 AC130650.2-201ENST00000618736 2403 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDCA3Q99618 AP000776.1-201ENST00000530032 1663 ntBASIC3.62□□□□□ -1.83
CDCA3Q99618 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDCA3Q99618 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CDCA3Q99618 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.61□□□□□ -1.83
CDCA3Q99618 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDCA3Q99618 FAM133CP-201ENST00000332869 704 ntBASIC3.61□□□□□ -1.83
CDCA3Q99618 SNORA51.6-201ENST00000384151 125 ntBASIC3.61□□□□□ -1.83
CDCA3Q99618 MIR506-201ENST00000384998 124 ntBASIC3.61□□□□□ -1.83
CDCA3Q99618 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.61□□□□□ -1.83
CDCA3Q99618 RPL31P2-201ENST00000413849 377 ntBASIC3.61□□□□□ -1.83
CDCA3Q99618 AC006960.1-201ENST00000419980 153 ntBASIC3.61□□□□□ -1.83
CDCA3Q99618 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.61□□□□□ -1.83
CDCA3Q99618 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.61□□□□□ -1.83
CDCA3Q99618 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.61□□□□□ -1.83
CDCA3Q99618 USP9YP7-201ENST00000436723 430 ntBASIC3.61□□□□□ -1.83
CDCA3Q99618 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.61□□□□□ -1.83
CDCA3Q99618 RPL23AP33-201ENST00000442301 452 ntBASIC3.61□□□□□ -1.83
CDCA3Q99618 USP9YP32-201ENST00000452432 430 ntBASIC3.61□□□□□ -1.83
CDCA3Q99618 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
CDCA3Q99618 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.61□□□□□ -1.83
CDCA3Q99618 AC021146.8-201ENST00000507455 733 ntBASIC3.61□□□□□ -1.83
CDCA3Q99618 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.61□□□□□ -1.83
CDCA3Q99618 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.61□□□□□ -1.83
CDCA3Q99618 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.61□□□□□ -1.83
CDCA3Q99618 APOOP4-201ENST00000513530 597 ntBASIC3.61□□□□□ -1.83
CDCA3Q99618 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDCA3Q99618 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms