Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.04□□□□□ -1.76
NEK1Q96PY6 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NEK1Q96PY6 AC005832.3-201ENST00000537929 631 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.04□□□□□ -1.76
NEK1Q96PY6 AC090502.2-201ENST00000549267 280 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 LSM6P2-201ENST00000552208 177 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.04□□□□□ -1.76
NEK1Q96PY6 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.04□□□□□ -1.76
NEK1Q96PY6 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 AC005000.2-201ENST00000605468 310 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 AC087683.2-201ENST00000611384 326 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 AC107075.1-201ENST00000613695 314 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.04□□□□□ -1.76
NEK1Q96PY6 AC011330.2-201ENST00000621680 635 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 AL392088.2-201ENST00000637607 285 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 MKKS-204ENST00000639674 192 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 PWAR6-201ENST00000552334 4618 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NEK1Q96PY6 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NEK1Q96PY6 ZNF876P-202ENST00000398732 1485 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 AL356274.2-201ENST00000624379 3752 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.04□□□□□ -1.76
NEK1Q96PY6 AC091152.2-201ENST00000591628 2569 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.04□□□□□ -1.76
NEK1Q96PY6 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NEK1Q96PY6 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NEK1Q96PY6 Y_RNA.192-201ENST00000363977 102 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 RNA5SP267-201ENST00000364893 126 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 Y_RNA.408-201ENST00000383987 102 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
NEK1Q96PY6 AC126124.2-201ENST00000413542 321 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 MTCYBP24-201ENST00000420387 1106 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 AL158156.1-201ENST00000422509 473 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 AL513174.1-201ENST00000423182 629 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 RPL31P54-201ENST00000429803 370 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.03□□□□□ -1.76
NEK1Q96PY6 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.03□□□□□ -1.76
NEK1Q96PY6 FGF7P5-201ENST00000441829 291 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.03□□□□□ -1.76
NEK1Q96PY6 AC004022.1-201ENST00000447766 1066 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.03□□□□□ -1.76
NEK1Q96PY6 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.03□□□□□ -1.76
NEK1Q96PY6 NECAP1P2-201ENST00000455668 727 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.03□□□□□ -1.76
NEK1Q96PY6 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.03□□□□□ -1.76
NEK1Q96PY6 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.03□□□□□ -1.76
NEK1Q96PY6 OR4G11P-201ENST00000492842 939 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.03□□□□□ -1.76
NEK1Q96PY6 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.03□□□□□ -1.76
NEK1Q96PY6 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.03□□□□□ -1.76
NEK1Q96PY6 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.03□□□□□ -1.76
NEK1Q96PY6 AC107934.2-201ENST00000518653 310 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 EEF1A1P37-201ENST00000522748 715 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.03□□□□□ -1.76
NEK1Q96PY6 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.03□□□□□ -1.76
NEK1Q96PY6 AC022022.2-201ENST00000602989 360 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 AC006557.5-201ENST00000603126 811 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 DUXAP3-201ENST00000603616 594 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 AL365503.1-201ENST00000605247 905 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 RMST_8.1-201ENST00000610287 165 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 AL592295.2-201ENST00000612578 206 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.03□□□□□ -1.76
NEK1Q96PY6 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.03□□□□□ -1.76
NEK1Q96PY6 AC073348.1-201ENST00000623002 331 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 AP002782.1-201ENST00000623107 614 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 SCARNA15.3-201ENST00000626315 122 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 SCARNA4.1-201ENST00000628597 123 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 AC127502.3-201ENST00000636170 1206 ntBASIC4.03□□□□□ -1.76
NEK1Q96PY6 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NEK1Q96PY6 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
NEK1Q96PY6 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
NEK1Q96PY6 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NEK1Q96PY6 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.02□□□□□ -1.77
NEK1Q96PY6 AC107982.1-201ENST00000507171 1300 ntBASIC4.02□□□□□ -1.77
NEK1Q96PY6 RNA5SP197-201ENST00000363357 119 ntBASIC4.02□□□□□ -1.77
NEK1Q96PY6 AP002088.1-201ENST00000382740 395 ntBASIC4.02□□□□□ -1.77
NEK1Q96PY6 RNU6-657P-201ENST00000383904 107 ntBASIC4.02□□□□□ -1.77
NEK1Q96PY6 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.02□□□□□ -1.77
NEK1Q96PY6 RNU2-28P-201ENST00000410457 189 ntBASIC4.02□□□□□ -1.77
NEK1Q96PY6 RNA5SP80-201ENST00000410475 111 ntBASIC4.02□□□□□ -1.77
NEK1Q96PY6 LUZP4P1-201ENST00000415420 344 ntBASIC4.02□□□□□ -1.77
NEK1Q96PY6 AL356968.1-201ENST00000416622 474 ntBASIC4.02□□□□□ -1.77
NEK1Q96PY6 BX842559.1-201ENST00000419615 532 ntBASIC4.02□□□□□ -1.77
NEK1Q96PY6 XKRYP1-201ENST00000423438 492 ntBASIC4.02□□□□□ -1.77
NEK1Q96PY6 RPL23AP82-202ENST00000427528 469 ntBASIC4.02□□□□□ -1.77
NEK1Q96PY6 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.02□□□□□ -1.77
NEK1Q96PY6 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.02□□□□□ -1.77
NEK1Q96PY6 XKRYP2-201ENST00000432915 492 ntBASIC4.02□□□□□ -1.77
NEK1Q96PY6 ATP5F1P1-201ENST00000433775 569 ntBASIC4.02□□□□□ -1.77
NEK1Q96PY6 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.02□□□□□ -1.77
NEK1Q96PY6 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.02□□□□□ -1.77
NEK1Q96PY6 AC004801.2-202ENST00000463559 283 ntBASIC4.02□□□□□ -1.77
NEK1Q96PY6 RPL5P24-201ENST00000463742 885 ntBASIC4.02□□□□□ -1.77
NEK1Q96PY6 CENPBD1P1-201ENST00000464061 469 ntBASIC4.02□□□□□ -1.77
NEK1Q96PY6 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NEK1Q96PY6 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.02□□□□□ -1.77
NEK1Q96PY6 AC119751.5-201ENST00000514077 770 ntBASIC4.02□□□□□ -1.77
NEK1Q96PY6 RN7SKP287-201ENST00000516546 266 ntBASIC4.02□□□□□ -1.77
NEK1Q96PY6 RNU6-1261P-201ENST00000517194 104 ntBASIC4.02□□□□□ -1.77
NEK1Q96PY6 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms