Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
DUX3Q96PT4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.38□□□□□ -1.87
DUX3Q96PT4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
DUX3Q96PT4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DUX3Q96PT4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DUX3Q96PT4 AC117529.2-201ENST00000512159 2068 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 DBF4P1-201ENST00000412976 1892 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
DUX3Q96PT4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 OR5J1P-201ENST00000313544 939 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DUX3Q96PT4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 MIR383-201ENST00000362257 73 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 RNU6-441P-201ENST00000384545 106 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 MIR506-201ENST00000384998 124 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 SNORD96B-201ENST00000386148 79 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 DSTNP4-201ENST00000399472 474 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 AC097374.1-203ENST00000400783 485 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 HDGFP1-201ENST00000405943 252 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 RNA5SP36-201ENST00000410197 133 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 VDAC1P9-201ENST00000412766 841 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 CCDC58P2-201ENST00000417131 366 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 RPL36AP36-201ENST00000418616 301 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 AL109913.1-201ENST00000421173 514 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 AC069157.1-201ENST00000421749 137 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 EIF4EP1-201ENST00000422311 642 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 AL513174.1-201ENST00000423182 629 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 ISCA1P6-201ENST00000427740 390 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 AC073464.1-201ENST00000429823 534 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 USP9YP7-201ENST00000436723 430 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 MTCO1P48-201ENST00000448024 1096 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 USP9YP32-201ENST00000452432 430 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 Z82190.1-201ENST00000454534 490 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 AC013267.1-201ENST00000458227 267 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 SNORD108-201ENST00000459332 71 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DUX3Q96PT4 RPS15AP17-201ENST00000470598 390 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 RPS3AP17-201ENST00000472594 777 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 MTND1P3-201ENST00000484956 952 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 DEFB109F-201ENST00000491870 277 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 AC091133.4-201ENST00000511142 308 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 RNU6-507P-201ENST00000516045 100 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 Vault.1-201ENST00000516474 102 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 RNA5SP73-201ENST00000516744 108 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 RNU2-46P-201ENST00000517038 113 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 MIR4644-201ENST00000579929 84 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 AP002360.3-201ENST00000607673 710 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 ZYXP1-201ENST00000617638 118 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 uc_338.13-201ENST00000618243 179 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 MIR6891-201ENST00000618788 93 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 AC009268.2-201ENST00000621925 457 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 AC005609.4-201ENST00000625071 447 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 AC019226.1-201ENST00000625666 515 ntBASIC3.37□□□□□ -1.87
DUX3Q96PT4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DUX3Q96PT4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
DUX3Q96PT4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DUX3Q96PT4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
DUX3Q96PT4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.37□□□□□ -1.87
DUX3Q96PT4 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DUX3Q96PT4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
DUX3Q96PT4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
DUX3Q96PT4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DUX3Q96PT4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
DUX3Q96PT4 EIF2AP4-201ENST00000424793 1781 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
DUX3Q96PT4 Y_RNA.70-201ENST00000362886 110 ntBASIC3.36□□□□□ -1.87
DUX3Q96PT4 RNU6-769P-201ENST00000384407 104 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms