Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AC005332.6-201ENST00000613178 446 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 AL157817.1-201ENST00000614264 790 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 PLCE1P1-201ENST00000622094 305 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 AC004808.1-201ENST00000627671 721 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AL049780.3-201ENST00000624612 1583 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AL672296.1-201ENST00000427780 2158 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AC073346.2-201ENST00000624724 2058 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF560Q96MR9 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF560Q96MR9 Y_RNA.25-201ENST00000362528 102 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 RNA5SP295-201ENST00000362655 121 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 RNA5SP387-201ENST00000364226 106 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF560Q96MR9 RNU6-712P-201ENST00000410558 100 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 HMGN1P24-201ENST00000412282 298 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AC099677.1-201ENST00000420575 175 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AC007435.1-201ENST00000421086 415 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF560Q96MR9 ATP5C1P1-201ENST00000441945 895 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 VN1R10P-201ENST00000447106 875 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 RPL12P26-201ENST00000452430 487 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 HMGB1P15-201ENST00000453854 435 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 BTF3P5-201ENST00000457252 467 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AC010460.2-201ENST00000509054 677 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 MTCYBP16-201ENST00000509187 1129 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF560Q96MR9 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AC087808.1-201ENST00000520501 361 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.55□□□□□ -1.84
ZNF560Q96MR9 HIGD1AP1-201ENST00000550979 275 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 YWHAZP1-201ENST00000556286 722 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 GTF2IP8-201ENST00000560687 584 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AC138915.2-201ENST00000569776 97 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AC011468.4-201ENST00000603942 409 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AL162713.1-201ENST00000604480 262 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AC055876.5-201ENST00000605667 259 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AC018755.4-201ENST00000619715 454 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AC123767.1-202ENST00000620407 817 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.55□□□□□ -1.84
ZNF560Q96MR9 SNORA50A-202ENST00000629536 136 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 AL021368.2-201ENST00000606125 5352 ntBASIC3.55□□□□□ -1.84
ZNF560Q96MR9 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
ZNF560Q96MR9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF560Q96MR9 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF560Q96MR9 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
ZNF560Q96MR9 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
ZNF560Q96MR9 RNU6-1176P-201ENST00000390955 107 ntBASIC3.54□□□□□ -1.84
ZNF560Q96MR9 AP000567.1-201ENST00000406413 156 ntBASIC3.54□□□□□ -1.84
ZNF560Q96MR9 RPS15AP6-201ENST00000420703 385 ntBASIC3.54□□□□□ -1.84
ZNF560Q96MR9 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF560Q96MR9 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.54□□□□□ -1.84
ZNF560Q96MR9 HMGB3P6-201ENST00000444896 598 ntBASIC3.54□□□□□ -1.84
ZNF560Q96MR9 MTCYBP11-201ENST00000447254 1109 ntBASIC3.54□□□□□ -1.84
ZNF560Q96MR9 MTND2P19-201ENST00000449129 1012 ntBASIC3.54□□□□□ -1.84
ZNF560Q96MR9 snoU13.4-201ENST00000458916 104 ntBASIC3.54□□□□□ -1.84
ZNF560Q96MR9 AC010468.1-201ENST00000461022 817 ntBASIC3.54□□□□□ -1.84
ZNF560Q96MR9 AC092757.1-201ENST00000467293 467 ntBASIC3.54□□□□□ -1.84
ZNF560Q96MR9 AC021678.1-201ENST00000505195 936 ntBASIC3.54□□□□□ -1.84
ZNF560Q96MR9 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF560Q96MR9 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.54□□□□□ -1.84
ZNF560Q96MR9 RNU6-276P-201ENST00000516114 96 ntBASIC3.54□□□□□ -1.84
ZNF560Q96MR9 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.54□□□□□ -1.84
ZNF560Q96MR9 OR4P1P-201ENST00000530808 1136 ntBASIC3.54□□□□□ -1.84
ZNF560Q96MR9 AL139174.1-201ENST00000531489 886 ntBASIC3.54□□□□□ -1.84
ZNF560Q96MR9 AC018630.1-201ENST00000541376 925 ntBASIC3.54□□□□□ -1.84
ZNF560Q96MR9 AC125611.1-201ENST00000549563 229 ntBASIC3.54□□□□□ -1.84
ZNF560Q96MR9 SYF2P1-201ENST00000550658 413 ntBASIC3.54□□□□□ -1.84
ZNF560Q96MR9 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF560Q96MR9 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF560Q96MR9 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF560Q96MR9 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF560Q96MR9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF560Q96MR9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF560Q96MR9 RNU5E-10P-201ENST00000363506 118 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 SNORA38.1-201ENST00000364172 131 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 snoZ40.1-201ENST00000364540 72 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 Y_RNA.333-201ENST00000365274 102 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF560Q96MR9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF560Q96MR9 OR4K6P-201ENST00000416478 897 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 Z75741.2-201ENST00000417272 1167 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF560Q96MR9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.53□□□□□ -1.84
ZNF560Q96MR9 AC006028.1-201ENST00000438379 402 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 RNF2P1-201ENST00000442955 1010 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms