Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 MIR1193-201ENST00000408109 78 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 RNA5SP44-201ENST00000410446 133 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 RN7SKP159-201ENST00000410657 292 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 RAB28P1-201ENST00000411517 641 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 AC092634.6-201ENST00000418558 192 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 AC008280.1-201ENST00000418851 412 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 BX842559.1-201ENST00000419615 532 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 GTF2IP23-201ENST00000423746 351 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 MTATP6P4-201ENST00000427725 675 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 AC114973.1-201ENST00000429057 632 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 AC104332.2-201ENST00000429959 156 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 Z80107.1-201ENST00000436830 412 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 AL592437.1-201ENST00000443781 492 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 AL358794.1-201ENST00000445689 381 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 USP9YP25-201ENST00000457708 443 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 AC025518.1-201ENST00000479856 347 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 AC108078.3-201ENST00000502633 489 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 RNF138P1-201ENST00000502765 546 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 PRELID3BP5-201ENST00000508612 460 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 SNORA48.10-201ENST00000516965 160 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 RNA5SP135-201ENST00000517019 125 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 SNORA31.20-201ENST00000517111 133 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 PAICSP4-201ENST00000517543 1253 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 MIR4504-201ENST00000577413 92 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 AC078899.3-201ENST00000599065 212 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 AC024941.1-201ENST00000612250 334 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 AC068831.8-201ENST00000620171 435 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC00477Q96M19 LINC02211-204ENST00000642024 1070 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC00477Q96M19 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC00477Q96M19 MTND5P31-201ENST00000419366 1374 ntBASIC2.49□□□□□ -2.01
LINC00477Q96M19 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
LINC00477Q96M19 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC00477Q96M19 AC109315.1-201ENST00000584143 1347 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC00477Q96M19 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.48□□□□□ -2.01
LINC00477Q96M19 AL035425.3-201ENST00000564206 4996 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
LINC00477Q96M19 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC00477Q96M19 ANKRD36P1-201ENST00000344424 659 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 RNA5SP124-201ENST00000362739 110 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC00477Q96M19 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
LINC00477Q96M19 RNU6-1226P-201ENST00000384317 107 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 RNU6-441P-201ENST00000384545 106 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AL031121.1-201ENST00000406553 254 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AL583834.1-201ENST00000406943 343 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
LINC00477Q96M19 RNU6-584P-201ENST00000410350 95 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 CYCSP19-201ENST00000411715 316 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 NDUFB4P5-201ENST00000415445 361 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 RPL7P10-201ENST00000417407 739 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.48□□□□□ -2.01
LINC00477Q96M19 RPS3AP37-201ENST00000419176 745 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AC006960.1-201ENST00000419980 153 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC00477Q96M19 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC00477Q96M19 HSFY1P1-201ENST00000423928 1178 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 USP9YP36-201ENST00000424581 829 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.48□□□□□ -2.01
LINC00477Q96M19 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 GTF2IP7-202ENST00000436677 309 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 FTH1P1-201ENST00000437933 532 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AC009969.1-201ENST00000438726 172 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AC092641.1-201ENST00000440229 772 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC00477Q96M19 CDC27P1-201ENST00000445384 715 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.48□□□□□ -2.01
LINC00477Q96M19 RBMY2UP-201ENST00000453474 324 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 snoU13.4-201ENST00000458916 104 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AC005410.1-202ENST00000460347 485 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 HMGB1P25-201ENST00000468402 607 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 ACTR3P3-201ENST00000480448 893 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AC106707.2-201ENST00000484182 374 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.48□□□□□ -2.01
LINC00477Q96M19 AC091951.3-201ENST00000504093 246 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AC021146.8-201ENST00000507455 733 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms