Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
USP47Q96K76 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
USP47Q96K76 U8.2-201ENST00000363156 134 ntBASIC3.53□□□□□ -1.84
USP47Q96K76 MIR27B-201ENST00000385129 97 ntBASIC3.53□□□□□ -1.84
USP47Q96K76 DNAJC19P6-201ENST00000401853 280 ntBASIC3.53□□□□□ -1.84
USP47Q96K76 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.53□□□□□ -1.84
USP47Q96K76 SNORA3.2-201ENST00000408221 125 ntBASIC3.53□□□□□ -1.84
USP47Q96K76 RNU2-21P-201ENST00000410368 188 ntBASIC3.53□□□□□ -1.84
USP47Q96K76 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.53□□□□□ -1.84
USP47Q96K76 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.53□□□□□ -1.84
USP47Q96K76 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.53□□□□□ -1.84
USP47Q96K76 AC104689.1-201ENST00000473356 768 ntBASIC3.53□□□□□ -1.84
USP47Q96K76 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.53□□□□□ -1.84
USP47Q96K76 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.53□□□□□ -1.84
USP47Q96K76 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.53□□□□□ -1.84
USP47Q96K76 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.53□□□□□ -1.84
USP47Q96K76 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.53□□□□□ -1.84
USP47Q96K76 MTND2P26-201ENST00000528255 1029 ntBASIC3.53□□□□□ -1.84
USP47Q96K76 AC139103.1-201ENST00000534696 1030 ntBASIC3.53□□□□□ -1.84
USP47Q96K76 ELOCP31-201ENST00000540463 467 ntBASIC3.53□□□□□ -1.84
USP47Q96K76 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.53□□□□□ -1.84
USP47Q96K76 AC025918.2-201ENST00000558683 763 ntBASIC3.53□□□□□ -1.84
USP47Q96K76 MIR5092-201ENST00000583139 88 ntBASIC3.53□□□□□ -1.84
USP47Q96K76 MIR4769-201ENST00000584126 77 ntBASIC3.53□□□□□ -1.84
USP47Q96K76 AC100814.1-201ENST00000606963 623 ntBASIC3.53□□□□□ -1.84
USP47Q96K76 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.53□□□□□ -1.84
USP47Q96K76 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP47Q96K76 RNU6-252P-201ENST00000363232 107 ntBASIC3.52□□□□□ -1.85
USP47Q96K76 EIF5P1-201ENST00000400019 1231 ntBASIC3.52□□□□□ -1.85
USP47Q96K76 ATF1P1-201ENST00000406040 927 ntBASIC3.52□□□□□ -1.85
USP47Q96K76 RPS15AP40-201ENST00000419621 391 ntBASIC3.52□□□□□ -1.85
USP47Q96K76 AL691517.1-201ENST00000440833 1235 ntBASIC3.52□□□□□ -1.85
USP47Q96K76 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.52□□□□□ -1.85
USP47Q96K76 HMGB3P30-201ENST00000457863 606 ntBASIC3.52□□□□□ -1.85
USP47Q96K76 AP000873.1-201ENST00000463987 400 ntBASIC3.52□□□□□ -1.85
USP47Q96K76 AC087385.1-201ENST00000475062 312 ntBASIC3.52□□□□□ -1.85
USP47Q96K76 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.52□□□□□ -1.85
USP47Q96K76 C1DP5-201ENST00000525775 383 ntBASIC3.52□□□□□ -1.85
USP47Q96K76 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.52□□□□□ -1.85
USP47Q96K76 MIR4524B-201ENST00000581569 115 ntBASIC3.52□□□□□ -1.85
USP47Q96K76 VN1R78P-201ENST00000597393 564 ntBASIC3.52□□□□□ -1.85
USP47Q96K76 MIR1264-201ENST00000616374 69 ntBASIC3.52□□□□□ -1.85
USP47Q96K76 AC006065.5-201ENST00000623427 349 ntBASIC3.52□□□□□ -1.85
USP47Q96K76 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP47Q96K76 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
USP47Q96K76 ZNF658B-202ENST00000615961 3375 ntBASIC3.52□□□□□ -1.85
USP47Q96K76 RNU6-1293P-201ENST00000384077 107 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 RN7SKP123-201ENST00000410732 291 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 RNA5SP344-201ENST00000411081 104 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.51□□□□□ -1.85
USP47Q96K76 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.51□□□□□ -1.85
USP47Q96K76 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.51□□□□□ -1.85
USP47Q96K76 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.51□□□□□ -1.85
USP47Q96K76 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.51□□□□□ -1.85
USP47Q96K76 ZFAND6P1-201ENST00000434138 605 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
USP47Q96K76 UBE2D3P1-201ENST00000436669 444 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 HMGB1P48-201ENST00000446155 598 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.51□□□□□ -1.85
USP47Q96K76 RN7SKP277-201ENST00000516895 283 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.51□□□□□ -1.85
USP47Q96K76 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.51□□□□□ -1.85
USP47Q96K76 AC233266.2-201ENST00000567067 528 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.51□□□□□ -1.85
USP47Q96K76 MIR4506-201ENST00000584693 77 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 AC007621.1-201ENST00000604544 437 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 AC135178.6-201ENST00000605314 398 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 AC079791.1-201ENST00000605356 973 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.51□□□□□ -1.85
USP47Q96K76 AC104307.1-201ENST00000616142 196 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.51□□□□□ -1.85
USP47Q96K76 RNU6-156P-201ENST00000621869 107 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
USP47Q96K76 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.51□□□□□ -1.85
USP47Q96K76 AL162578.1-201ENST00000406202 378 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.51□□□□□ -1.85
USP47Q96K76 NUP35P2-201ENST00000416748 943 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.51□□□□□ -1.85
USP47Q96K76 RPL23AP23-201ENST00000452590 471 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 snoU13.7-201ENST00000459220 104 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.51□□□□□ -1.85
USP47Q96K76 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.51□□□□□ -1.85
USP47Q96K76 AC103833.1-201ENST00000517442 172 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.51□□□□□ -1.85
USP47Q96K76 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 AP003122.3-201ENST00000526316 255 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 AP000916.1-201ENST00000533869 835 ntBASIC3.51□□□□□ -1.85
USP47Q96K76 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
USP47Q96K76 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.51□□□□□ -1.85
USP47Q96K76 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.5□□□□□ -1.85
USP47Q96K76 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
USP47Q96K76 SNORD6-201ENST00000365444 73 ntBASIC3.5□□□□□ -1.85
USP47Q96K76 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
USP47Q96K76 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USP47Q96K76 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
USP47Q96K76 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
USP47Q96K76 AL513321.1-201ENST00000441175 761 ntBASIC3.5□□□□□ -1.85
USP47Q96K76 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.5□□□□□ -1.85
USP47Q96K76 AL513343.1-201ENST00000451818 792 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms