Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 Y_RNA.813-201ENST00000364639 102 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHDQ96IW2 RNU6-1011P-201ENST00000384668 107 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SHDQ96IW2 RNU6-510P-201ENST00000391239 108 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 AL162578.1-201ENST00000406202 378 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 RNU2-29P-201ENST00000410423 189 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 RNU6-193P-201ENST00000410977 107 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.14□□□□□ -1.59
SHDQ96IW2 RPL21P24-201ENST00000413752 448 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 UBE2FP1-201ENST00000416536 447 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 AL161631.1-201ENST00000417933 486 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 MTCYBP8-201ENST00000422855 651 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 RPL35AP12-201ENST00000425362 338 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 RPL34P6-201ENST00000432390 345 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 NRBF2P3-201ENST00000432731 865 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.14□□□□□ -1.59
SHDQ96IW2 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.14□□□□□ -1.59
SHDQ96IW2 AC007967.1-201ENST00000455422 1159 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 MRPS17P3-201ENST00000465453 385 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 NIPA2P2-201ENST00000496376 1083 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 AC100870.1-201ENST00000522035 505 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.14□□□□□ -1.59
SHDQ96IW2 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.14□□□□□ -1.59
SHDQ96IW2 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SHDQ96IW2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.14□□□□□ -1.59
SHDQ96IW2 BNIP3P5-201ENST00000562290 498 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 AC037471.2-201ENST00000564941 598 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.14□□□□□ -1.59
SHDQ96IW2 TVP23CP2-201ENST00000571473 623 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 AP001029.3-201ENST00000588063 596 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 VN1R80P-201ENST00000597126 338 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHDQ96IW2 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
SHDQ96IW2 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHDQ96IW2 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHDQ96IW2 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SHDQ96IW2 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SHDQ96IW2 BTBD10P1-201ENST00000549824 1352 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.14□□□□□ -1.59
SHDQ96IW2 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SHDQ96IW2 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHDQ96IW2 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.13□□□□□ -1.59
SHDQ96IW2 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHDQ96IW2 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.13□□□□□ -1.59
SHDQ96IW2 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHDQ96IW2 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SHDQ96IW2 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SHDQ96IW2 RNU5E-6P-201ENST00000365574 115 ntBASIC5.13□□□□□ -1.59
SHDQ96IW2 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
SHDQ96IW2 RNU6-332P-201ENST00000391193 108 ntBASIC5.13□□□□□ -1.59
SHDQ96IW2 RNU2-36P-201ENST00000410361 191 ntBASIC5.13□□□□□ -1.59
SHDQ96IW2 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.13□□□□□ -1.59
SHDQ96IW2 RWDD4P2-201ENST00000426392 563 ntBASIC5.13□□□□□ -1.59
SHDQ96IW2 SRIP2-201ENST00000428470 166 ntBASIC5.13□□□□□ -1.59
SHDQ96IW2 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.13□□□□□ -1.59
SHDQ96IW2 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC5.13□□□□□ -1.59
SHDQ96IW2 RPS29P15-201ENST00000458329 171 ntBASIC5.13□□□□□ -1.59
SHDQ96IW2 AC079804.1-201ENST00000461922 436 ntBASIC5.13□□□□□ -1.59
SHDQ96IW2 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.13□□□□□ -1.59
SHDQ96IW2 MRPS33P2-201ENST00000507850 322 ntBASIC5.13□□□□□ -1.59
SHDQ96IW2 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.13□□□□□ -1.59
SHDQ96IW2 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.13□□□□□ -1.59
SHDQ96IW2 RNU6-1095P-201ENST00000516148 108 ntBASIC5.13□□□□□ -1.59
SHDQ96IW2 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.13□□□□□ -1.59
SHDQ96IW2 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.13□□□□□ -1.59
SHDQ96IW2 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SHDQ96IW2 OR5B19P-201ENST00000531766 928 ntBASIC5.13□□□□□ -1.59
SHDQ96IW2 OR5AL2P-201ENST00000532185 920 ntBASIC5.13□□□□□ -1.59
SHDQ96IW2 AP001880.2-201ENST00000538233 448 ntBASIC5.13□□□□□ -1.59
SHDQ96IW2 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.13□□□□□ -1.59
SHDQ96IW2 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.13□□□□□ -1.59
SHDQ96IW2 RN7SL690P-201ENST00000582087 240 ntBASIC5.13□□□□□ -1.59
SHDQ96IW2 AC020910.3-201ENST00000603701 874 ntBASIC5.13□□□□□ -1.59
SHDQ96IW2 AC010680.4-201ENST00000605334 543 ntBASIC5.13□□□□□ -1.59
SHDQ96IW2 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.13□□□□□ -1.59
SHDQ96IW2 AC009233.1-201ENST00000616477 371 ntBASIC5.13□□□□□ -1.59
SHDQ96IW2 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC5.13□□□□□ -1.59
SHDQ96IW2 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.13□□□□□ -1.59
SHDQ96IW2 MIR4275-201ENST00000636486 87 ntBASIC5.13□□□□□ -1.59
SHDQ96IW2 MTND1P37-201ENST00000636562 264 ntBASIC5.13□□□□□ -1.59
SHDQ96IW2 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHDQ96IW2 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
SHDQ96IW2 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
SHDQ96IW2 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.13□□□□□ -1.59
SHDQ96IW2 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.13□□□□□ -1.59
SHDQ96IW2 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SHDQ96IW2 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SHDQ96IW2 EXOC5P1-201ENST00000510543 1969 ntBASIC5.13□□□□□ -1.59
SHDQ96IW2 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.13□□□□□ -1.59
SHDQ96IW2 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHDQ96IW2 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.12□□□□□ -1.59
SHDQ96IW2 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHDQ96IW2 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHDQ96IW2 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.12□□□□□ -1.59
SHDQ96IW2 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHDQ96IW2 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.12□□□□□ -1.59
SHDQ96IW2 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.12□□□□□ -1.59
SHDQ96IW2 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHDQ96IW2 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms