Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LRCH3Q96II8 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LRCH3Q96II8 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LRCH3Q96II8 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.5□□□□□ -1.37
LRCH3Q96II8 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LRCH3Q96II8 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LRCH3Q96II8 RNU6-1226P-201ENST00000384317 107 ntBASIC6.5□□□□□ -1.37
LRCH3Q96II8 RNU6-516P-201ENST00000411381 104 ntBASIC6.5□□□□□ -1.37
LRCH3Q96II8 RPL23AP36-201ENST00000413895 458 ntBASIC6.5□□□□□ -1.37
LRCH3Q96II8 AL159987.2-201ENST00000432754 307 ntBASIC6.5□□□□□ -1.37
LRCH3Q96II8 AC007389.2-201ENST00000434630 306 ntBASIC6.5□□□□□ -1.37
LRCH3Q96II8 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.5□□□□□ -1.37
LRCH3Q96II8 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.5□□□□□ -1.37
LRCH3Q96II8 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.5□□□□□ -1.37
LRCH3Q96II8 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC6.5□□□□□ -1.37
LRCH3Q96II8 AC140059.1-201ENST00000489238 361 ntBASIC6.5□□□□□ -1.37
LRCH3Q96II8 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC6.5□□□□□ -1.37
LRCH3Q96II8 AC007016.1-201ENST00000512110 244 ntBASIC6.5□□□□□ -1.37
LRCH3Q96II8 RNU6-615P-201ENST00000516065 106 ntBASIC6.5□□□□□ -1.37
LRCH3Q96II8 RNU6-919P-201ENST00000516731 104 ntBASIC6.5□□□□□ -1.37
LRCH3Q96II8 HMGN2P36-201ENST00000529541 409 ntBASIC6.5□□□□□ -1.37
LRCH3Q96II8 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.5□□□□□ -1.37
LRCH3Q96II8 MEG8-215ENST00000555354 469 ntTSL 3 BASIC6.5□□□□□ -1.37
LRCH3Q96II8 CPDP1-201ENST00000579660 283 ntBASIC6.5□□□□□ -1.37
LRCH3Q96II8 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.5□□□□□ -1.37
LRCH3Q96II8 MIR3976-201ENST00000606807 139 ntBASIC6.5□□□□□ -1.37
LRCH3Q96II8 FP236240.3-201ENST00000623061 327 ntBASIC6.5□□□□□ -1.37
LRCH3Q96II8 AC091953.3-201ENST00000623220 236 ntBASIC6.5□□□□□ -1.37
LRCH3Q96II8 U6.92-201ENST00000636464 89 ntBASIC6.5□□□□□ -1.37
LRCH3Q96II8 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LRCH3Q96II8 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.5□□□□□ -1.37
LRCH3Q96II8 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
LRCH3Q96II8 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LRCH3Q96II8 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
LRCH3Q96II8 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LRCH3Q96II8 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
LRCH3Q96II8 AC024651.2-201ENST00000562480 2098 ntBASIC6.49□□□□□ -1.37
LRCH3Q96II8 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LRCH3Q96II8 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.49□□□□□ -1.37
LRCH3Q96II8 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LRCH3Q96II8 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.49□□□□□ -1.37
LRCH3Q96II8 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LRCH3Q96II8 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
LRCH3Q96II8 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LRCH3Q96II8 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.49□□□□□ -1.37
LRCH3Q96II8 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LRCH3Q96II8 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
LRCH3Q96II8 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
LRCH3Q96II8 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LRCH3Q96II8 Y_RNA.44-201ENST00000362676 108 ntBASIC6.49□□□□□ -1.37
LRCH3Q96II8 SNORD82-201ENST00000365530 70 ntBASIC6.49□□□□□ -1.37
LRCH3Q96II8 CRP-202ENST00000368110 667 ntTSL 3 BASIC6.49□□□□□ -1.37
LRCH3Q96II8 RNU6-1035P-201ENST00000384477 107 ntBASIC6.49□□□□□ -1.37
LRCH3Q96II8 RNU6-102P-201ENST00000384485 104 ntBASIC6.49□□□□□ -1.37
LRCH3Q96II8 RNU6-700P-201ENST00000391043 107 ntBASIC6.49□□□□□ -1.37
LRCH3Q96II8 RNU6-131P-201ENST00000391144 107 ntBASIC6.49□□□□□ -1.37
LRCH3Q96II8 RNU6-918P-201ENST00000391219 106 ntBASIC6.49□□□□□ -1.37
LRCH3Q96II8 AC013442.1-201ENST00000397347 228 ntBASIC6.49□□□□□ -1.37
LRCH3Q96II8 AL096829.1-201ENST00000413677 457 ntBASIC6.49□□□□□ -1.37
LRCH3Q96II8 HMGA1P8-201ENST00000414130 321 ntBASIC6.49□□□□□ -1.37
LRCH3Q96II8 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC6.49□□□□□ -1.37
LRCH3Q96II8 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC6.49□□□□□ -1.37
LRCH3Q96II8 AL358176.3-201ENST00000420757 454 ntBASIC6.49□□□□□ -1.37
LRCH3Q96II8 EI24P4-201ENST00000423683 1078 ntBASIC6.49□□□□□ -1.37
LRCH3Q96II8 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.49□□□□□ -1.37
LRCH3Q96II8 ERHP1-201ENST00000523006 310 ntBASIC6.49□□□□□ -1.37
LRCH3Q96II8 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC6.49□□□□□ -1.37
LRCH3Q96II8 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.49□□□□□ -1.37
LRCH3Q96II8 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC6.49□□□□□ -1.37
LRCH3Q96II8 AC027288.2-201ENST00000553028 243 ntBASIC6.49□□□□□ -1.37
LRCH3Q96II8 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC6.49□□□□□ -1.37
LRCH3Q96II8 AC096996.1-201ENST00000563813 325 ntBASIC6.49□□□□□ -1.37
LRCH3Q96II8 AC005951.2-201ENST00000576282 495 ntBASIC6.49□□□□□ -1.37
LRCH3Q96II8 MIR4504-201ENST00000577413 92 ntBASIC6.49□□□□□ -1.37
LRCH3Q96II8 FAM25E-202ENST00000608562 189 ntBASIC6.49□□□□□ -1.37
LRCH3Q96II8 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
LRCH3Q96II8 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
LRCH3Q96II8 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LRCH3Q96II8 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LRCH3Q96II8 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LRCH3Q96II8 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
LRCH3Q96II8 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LRCH3Q96II8 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
LRCH3Q96II8 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.49□□□□□ -1.37
LRCH3Q96II8 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LRCH3Q96II8 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
LRCH3Q96II8 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LRCH3Q96II8 EOGT-210ENST00000615922 1931 ntBASIC6.48□□□□□ -1.37
LRCH3Q96II8 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
LRCH3Q96II8 RBBP8P1-201ENST00000449447 1844 ntBASIC6.48□□□□□ -1.37
LRCH3Q96II8 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.48□□□□□ -1.37
LRCH3Q96II8 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.48□□□□□ -1.37
LRCH3Q96II8 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LRCH3Q96II8 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.48□□□□□ -1.37
LRCH3Q96II8 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
LRCH3Q96II8 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LRCH3Q96II8 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LRCH3Q96II8 Y_RNA.273-201ENST00000364703 102 ntBASIC6.48□□□□□ -1.37
LRCH3Q96II8 Y_RNA.343-201ENST00000365354 112 ntBASIC6.48□□□□□ -1.37
LRCH3Q96II8 Y_RNA.480-201ENST00000384364 102 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms