Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.17□□□□□ -2.06
TTC28Q96AY4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.17□□□□□ -2.06
TTC28Q96AY4 AC090543.2-201ENST00000483963 348 ntBASIC2.17□□□□□ -2.06
TTC28Q96AY4 AC093767.1-201ENST00000504523 156 ntBASIC2.17□□□□□ -2.06
TTC28Q96AY4 NARSP2-201ENST00000518524 679 ntBASIC2.17□□□□□ -2.06
TTC28Q96AY4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.17□□□□□ -2.06
TTC28Q96AY4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.17□□□□□ -2.06
TTC28Q96AY4 SETP1-201ENST00000556014 845 ntBASIC2.17□□□□□ -2.06
TTC28Q96AY4 HMGN2P28-201ENST00000606102 262 ntBASIC2.17□□□□□ -2.06
TTC28Q96AY4 OR11H5P-202ENST00000641612 1325 ntBASIC2.17□□□□□ -2.06
TTC28Q96AY4 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TTC28Q96AY4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.16□□□□□ -2.06
TTC28Q96AY4 GAPDHP27-201ENST00000447427 1020 ntBASIC2.16□□□□□ -2.06
TTC28Q96AY4 RPS6P4-201ENST00000494693 758 ntBASIC2.16□□□□□ -2.06
TTC28Q96AY4 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC2.16□□□□□ -2.06
TTC28Q96AY4 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC2.16□□□□□ -2.06
TTC28Q96AY4 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC2.16□□□□□ -2.06
TTC28Q96AY4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.16□□□□□ -2.06
TTC28Q96AY4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
TTC28Q96AY4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TTC28Q96AY4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
TTC28Q96AY4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TTC28Q96AY4 MIR148B-201ENST00000362252 99 ntBASIC2.16□□□□□ -2.06
TTC28Q96AY4 MIR598-201ENST00000384868 97 ntBASIC2.16□□□□□ -2.06
TTC28Q96AY4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TTC28Q96AY4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.16□□□□□ -2.06
TTC28Q96AY4 AC092427.1-202ENST00000430569 476 ntBASIC2.16□□□□□ -2.06
TTC28Q96AY4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC2.16□□□□□ -2.06
TTC28Q96AY4 AL118520.1-201ENST00000450770 291 ntBASIC2.16□□□□□ -2.06
TTC28Q96AY4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.16□□□□□ -2.06
TTC28Q96AY4 AC233279.1-201ENST00000455300 423 ntBASIC2.16□□□□□ -2.06
TTC28Q96AY4 HMGN1P7-201ENST00000491722 313 ntBASIC2.16□□□□□ -2.06
TTC28Q96AY4 MTCYBP20-201ENST00000524239 1129 ntBASIC2.16□□□□□ -2.06
TTC28Q96AY4 AL020991.1-201ENST00000612314 373 ntBASIC2.16□□□□□ -2.06
TTC28Q96AY4 AC091953.2-201ENST00000623979 160 ntBASIC2.16□□□□□ -2.06
TTC28Q96AY4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TTC28Q96AY4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TTC28Q96AY4 SNORA25.6-201ENST00000364121 118 ntBASIC2.15□□□□□ -2.06
TTC28Q96AY4 AC009237.8-201ENST00000445492 379 ntBASIC2.15□□□□□ -2.06
TTC28Q96AY4 AL645939.1-201ENST00000453429 797 ntBASIC2.15□□□□□ -2.06
TTC28Q96AY4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.15□□□□□ -2.06
TTC28Q96AY4 RNA5SP200-201ENST00000516360 103 ntBASIC2.15□□□□□ -2.06
TTC28Q96AY4 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.15□□□□□ -2.06
TTC28Q96AY4 AC019159.1-201ENST00000605094 187 ntBASIC2.15□□□□□ -2.06
TTC28Q96AY4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
TTC28Q96AY4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.15□□□□□ -2.07
TTC28Q96AY4 SNORA31-201ENST00000362607 130 ntBASIC2.15□□□□□ -2.07
TTC28Q96AY4 AL590004.2-201ENST00000404787 371 ntBASIC2.15□□□□□ -2.07
TTC28Q96AY4 AL034379.1-201ENST00000423216 253 ntBASIC2.15□□□□□ -2.07
TTC28Q96AY4 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC2.15□□□□□ -2.07
TTC28Q96AY4 AL365396.1-201ENST00000430854 671 ntBASIC2.15□□□□□ -2.07
TTC28Q96AY4 AL353597.2-202ENST00000434901 373 ntBASIC2.15□□□□□ -2.07
TTC28Q96AY4 AC244517.3-201ENST00000616254 1235 ntBASIC2.15□□□□□ -2.07
TTC28Q96AY4 AL356266.1-201ENST00000623311 483 ntBASIC2.15□□□□□ -2.07
TTC28Q96AY4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.15□□□□□ -2.07
TTC28Q96AY4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
TTC28Q96AY4 AC004965.1-201ENST00000413033 213 ntBASIC2.14□□□□□ -2.07
TTC28Q96AY4 RPL30P2-201ENST00000414021 291 ntBASIC2.14□□□□□ -2.07
TTC28Q96AY4 RPS12P23-201ENST00000419579 400 ntBASIC2.14□□□□□ -2.07
TTC28Q96AY4 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC2.14□□□□□ -2.07
TTC28Q96AY4 MTND2P29-201ENST00000438595 412 ntBASIC2.14□□□□□ -2.07
TTC28Q96AY4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.14□□□□□ -2.07
TTC28Q96AY4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.14□□□□□ -2.07
TTC28Q96AY4 RNA5SP380-201ENST00000517190 98 ntBASIC2.14□□□□□ -2.07
TTC28Q96AY4 RPL21P5-201ENST00000554662 472 ntBASIC2.14□□□□□ -2.07
TTC28Q96AY4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TTC28Q96AY4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TTC28Q96AY4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
TTC28Q96AY4 AL139811.1-201ENST00000424779 2299 ntBASIC2.14□□□□□ -2.07
TTC28Q96AY4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TTC28Q96AY4 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TTC28Q96AY4 SNORD114-22-201ENST00000365423 72 ntBASIC2.14□□□□□ -2.07
TTC28Q96AY4 RNA5SP38-201ENST00000410750 119 ntBASIC2.14□□□□□ -2.07
TTC28Q96AY4 RPL31P12-201ENST00000422587 358 ntBASIC2.14□□□□□ -2.07
TTC28Q96AY4 LINC00888-204ENST00000487386 421 ntBASIC2.14□□□□□ -2.07
TTC28Q96AY4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.14□□□□□ -2.07
TTC28Q96AY4 OOSP1P2-201ENST00000579644 351 ntBASIC2.14□□□□□ -2.07
TTC28Q96AY4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.14□□□□□ -2.07
TTC28Q96AY4 AC079298.2-201ENST00000623885 459 ntBASIC2.14□□□□□ -2.07
TTC28Q96AY4 AC093591.3-201ENST00000634516 308 ntBASIC2.14□□□□□ -2.07
TTC28Q96AY4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.14□□□□□ -2.07
TTC28Q96AY4 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TTC28Q96AY4 WWP1P1-201ENST00000466609 2769 ntBASIC2.13□□□□□ -2.07
TTC28Q96AY4 AC245100.2-201ENST00000454544 1679 ntBASIC2.13□□□□□ -2.07
TTC28Q96AY4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TTC28Q96AY4 RPL7P37-201ENST00000425095 738 ntBASIC2.13□□□□□ -2.07
TTC28Q96AY4 RPS7P2-201ENST00000435134 607 ntBASIC2.13□□□□□ -2.07
TTC28Q96AY4 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TTC28Q96AY4 AC007182.2-201ENST00000489251 402 ntBASIC2.13□□□□□ -2.07
TTC28Q96AY4 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.13□□□□□ -2.07
TTC28Q96AY4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.13□□□□□ -2.07
TTC28Q96AY4 ATP5EP1-201ENST00000510257 156 ntBASIC2.13□□□□□ -2.07
TTC28Q96AY4 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TTC28Q96AY4 AC012182.1-201ENST00000570133 895 ntBASIC2.13□□□□□ -2.07
TTC28Q96AY4 LINC00901.1-201ENST00000617252 152 ntBASIC2.13□□□□□ -2.07
TTC28Q96AY4 AF127577.6-201ENST00000623352 2191 ntBASIC2.13□□□□□ -2.07
TTC28Q96AY4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.13□□□□□ -2.07
TTC28Q96AY4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TTC28Q96AY4 Y_RNA.251-201ENST00000364551 99 ntBASIC2.13□□□□□ -2.07
TTC28Q96AY4 TPMTP3-201ENST00000411928 735 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms