Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AL139344.1-201ENST00000605228 195 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.34□□□□□ -1.87
RFT1Q96AA3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.34□□□□□ -1.87
RFT1Q96AA3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
RFT1Q96AA3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.34□□□□□ -1.87
RFT1Q96AA3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 AL590240.3-201ENST00000621416 943 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 AC073530.2-201ENST00000623987 261 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RFT1Q96AA3 AC011477.1-204ENST00000623416 1325 ntBASIC3.34□□□□□ -1.87
RFT1Q96AA3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.34□□□□□ -1.87
RFT1Q96AA3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
RFT1Q96AA3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.88
RFT1Q96AA3 AL022578.1-201ENST00000439330 1433 ntBASIC3.34□□□□□ -1.88
RFT1Q96AA3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.34□□□□□ -1.88
RFT1Q96AA3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.34□□□□□ -1.88
RFT1Q96AA3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.34□□□□□ -1.88
RFT1Q96AA3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RFT1Q96AA3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.34□□□□□ -1.88
RFT1Q96AA3 AL672296.1-201ENST00000427780 2158 ntBASIC3.34□□□□□ -1.88
RFT1Q96AA3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RFT1Q96AA3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RFT1Q96AA3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RFT1Q96AA3 OR5H2-201ENST00000355273 945 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.33□□□□□ -1.88
RFT1Q96AA3 RNU6-952P-201ENST00000391164 108 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 AL356131.1-201ENST00000405826 414 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 USP9YP33-201ENST00000412220 421 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 RPS15AP6-201ENST00000420703 385 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.33□□□□□ -1.88
RFT1Q96AA3 TXNL1P1-201ENST00000429528 554 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 USP9YP35-201ENST00000435696 412 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.33□□□□□ -1.88
RFT1Q96AA3 SETD6P1-201ENST00000444575 317 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 Z83846.1-201ENST00000446798 265 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.33□□□□□ -1.88
RFT1Q96AA3 AC006539.3-201ENST00000454258 129 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 ANKRD26P4-201ENST00000455755 950 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 snoU13.4-201ENST00000458916 104 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 AC010468.1-201ENST00000461022 817 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.33□□□□□ -1.88
RFT1Q96AA3 AC093267.1-201ENST00000489176 961 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.33□□□□□ -1.88
RFT1Q96AA3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.33□□□□□ -1.88
RFT1Q96AA3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.33□□□□□ -1.88
RFT1Q96AA3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.33□□□□□ -1.88
RFT1Q96AA3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.33□□□□□ -1.88
RFT1Q96AA3 RN7SKP289-201ENST00000517244 295 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 AC087369.1-201ENST00000520775 996 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 MRPL49P2-201ENST00000521066 465 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.33□□□□□ -1.88
RFT1Q96AA3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.33□□□□□ -1.88
RFT1Q96AA3 OR5AP1P-201ENST00000529730 940 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.33□□□□□ -1.88
RFT1Q96AA3 MRPS36P5-201ENST00000551909 298 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 DUXAP6-201ENST00000553858 601 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.33□□□□□ -1.88
RFT1Q96AA3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.33□□□□□ -1.88
RFT1Q96AA3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.33□□□□□ -1.88
RFT1Q96AA3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.33□□□□□ -1.88
RFT1Q96AA3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.33□□□□□ -1.88
RFT1Q96AA3 SNORD84-203ENST00000584275 78 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 NIFKP6-201ENST00000598115 845 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 AC146944.4-201ENST00000602697 718 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 AL353778.1-201ENST00000603149 408 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 AC004853.1-201ENST00000604902 698 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 AL133507.1-201ENST00000605269 557 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 AC084782.3-201ENST00000612282 578 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 AC021755.4-201ENST00000616620 456 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RFT1Q96AA3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RFT1Q96AA3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RFT1Q96AA3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RFT1Q96AA3 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.33□□□□□ -1.88
RFT1Q96AA3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
RFT1Q96AA3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RFT1Q96AA3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
RFT1Q96AA3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 AC118273.1-201ENST00000525324 3006 ntBASIC3.32□□□□□ -1.88
RFT1Q96AA3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RFT1Q96AA3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
RFT1Q96AA3 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
RFT1Q96AA3 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RFT1Q96AA3 RNU6-931P-201ENST00000363850 107 ntBASIC3.32□□□□□ -1.88
RFT1Q96AA3 SNORD3H-201ENST00000384486 214 ntBASIC3.32□□□□□ -1.88
RFT1Q96AA3 RPS26P8-201ENST00000393490 348 ntBASIC3.32□□□□□ -1.88
RFT1Q96AA3 RPL31P12-201ENST00000422587 358 ntBASIC3.32□□□□□ -1.88
RFT1Q96AA3 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 RPL7P52-201ENST00000449200 742 ntBASIC3.32□□□□□ -1.88
RFT1Q96AA3 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 MTND2P14-201ENST00000482139 351 ntBASIC3.32□□□□□ -1.88
RFT1Q96AA3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.32□□□□□ -1.88
RFT1Q96AA3 AC117522.2-201ENST00000510049 657 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms