Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AP001506.1-201ENST00000615444 211 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 AC079597.1-201ENST00000624306 508 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.67□□□□□ -1.66
HPS3Q969F9 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.67□□□□□ -1.66
HPS3Q969F9 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.67□□□□□ -1.66
HPS3Q969F9 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.67□□□□□ -1.66
HPS3Q969F9 MTND5P3-201ENST00000438536 1800 ntBASIC4.67□□□□□ -1.66
HPS3Q969F9 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HPS3Q969F9 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HPS3Q969F9 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HPS3Q969F9 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
HPS3Q969F9 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.66□□□□□ -1.66
HPS3Q969F9 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HPS3Q969F9 AC008725.1-201ENST00000605123 2263 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 AL136964.1-201ENST00000622038 2990 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.66□□□□□ -1.66
HPS3Q969F9 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HPS3Q969F9 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.66□□□□□ -1.66
HPS3Q969F9 AC092447.7-201ENST00000422212 1621 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HPS3Q969F9 RNU6-263P-201ENST00000363811 107 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 MIR124-3-201ENST00000384866 87 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 MIR513A2-201ENST00000385249 127 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HPS3Q969F9 FCF1P10-201ENST00000407590 479 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 RNU4-78P-201ENST00000410940 126 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 AC011933.1-201ENST00000413334 321 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 RPL17P36-201ENST00000420302 549 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 EIF1P3-201ENST00000423841 334 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 ELOCP30-201ENST00000447108 299 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 NDUFS5P3-201ENST00000450668 321 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 AC116533.1-201ENST00000459748 321 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 AC109327.1-201ENST00000471666 403 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.66□□□□□ -1.66
HPS3Q969F9 RPL35P6-201ENST00000490024 372 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.66□□□□□ -1.66
HPS3Q969F9 AC093824.1-201ENST00000508796 343 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 AC006499.6-201ENST00000511169 607 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 RN7SKP122-201ENST00000515923 296 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 RNA5SP73-201ENST00000516744 108 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.66□□□□□ -1.66
HPS3Q969F9 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HPS3Q969F9 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.66□□□□□ -1.66
HPS3Q969F9 AC022880.1-201ENST00000534017 973 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.66□□□□□ -1.66
HPS3Q969F9 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.66□□□□□ -1.66
HPS3Q969F9 TVP23BP1-201ENST00000557500 617 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.66□□□□□ -1.66
HPS3Q969F9 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.66□□□□□ -1.66
HPS3Q969F9 AL161729.3-201ENST00000603533 673 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 AC055876.5-201ENST00000605667 259 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 MIR432-201ENST00000606207 94 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 AC011816.2-201ENST00000607089 556 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 OR10AB1P-201ENST00000609613 938 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 AL589743.7-201ENST00000612637 233 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 SNX18P1Y-201ENST00000616231 511 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 MTND5P29-201ENST00000458676 1807 ntBASIC4.66□□□□□ -1.66
HPS3Q969F9 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HPS3Q969F9 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HPS3Q969F9 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
HPS3Q969F9 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
HPS3Q969F9 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HPS3Q969F9 MTND4P5-201ENST00000435821 1374 ntBASIC4.65□□□□□ -1.66
HPS3Q969F9 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
HPS3Q969F9 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HPS3Q969F9 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
HPS3Q969F9 SNORA37-201ENST00000384504 129 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 U3.20-201ENST00000390909 217 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 RPS20P2-201ENST00000402520 389 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 RNU6-648P-201ENST00000410190 107 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 RPS3AP3-201ENST00000411933 242 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.65□□□□□ -1.67
HPS3Q969F9 AL391219.1-201ENST00000422570 483 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 RBMY1KP-201ENST00000423480 476 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 CHIAP3-201ENST00000423668 1133 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.65□□□□□ -1.67
HPS3Q969F9 BX890604.2-201ENST00000427883 474 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.65□□□□□ -1.67
HPS3Q969F9 RPS6P12-201ENST00000432491 726 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 AC244505.5-201ENST00000443639 207 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 AC112653.1-201ENST00000443851 386 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.65□□□□□ -1.67
HPS3Q969F9 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.65□□□□□ -1.67
HPS3Q969F9 MTCYBP1-201ENST00000454315 1119 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 NDUFB4P2-201ENST00000509515 391 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 RNU6-720P-201ENST00000516363 108 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 MYL12AP1-201ENST00000518490 515 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 IFITM8P-201ENST00000522529 394 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.65□□□□□ -1.67
HPS3Q969F9 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.65□□□□□ -1.67
HPS3Q969F9 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.65□□□□□ -1.67
HPS3Q969F9 SETP7-201ENST00000552169 453 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.65□□□□□ -1.67
HPS3Q969F9 RPL21P5-201ENST00000554662 472 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 AC245505.1-201ENST00000556398 224 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.65□□□□□ -1.67
HPS3Q969F9 AC034268.2-201ENST00000571784 482 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 MIR3682-201ENST00000581338 84 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 MIR3138-201ENST00000585238 82 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 AC009977.1-201ENST00000586015 570 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms