Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SNORA63.1-201ENST00000362493 131 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 RNU6-582P-201ENST00000362989 107 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 SNORA7.4-201ENST00000384249 137 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 SNORD116-23-201ENST00000384645 92 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 SNORD15B-201ENST00000384714 146 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 MIR887-201ENST00000401258 79 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 RNA5SP129-201ENST00000410276 118 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 BTF3P8-201ENST00000414577 526 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 MTCYBP32-201ENST00000427945 1084 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 RPL31P54-201ENST00000429803 370 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 MTCYBP15-201ENST00000433123 1127 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 ARF4P4-201ENST00000439608 520 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 AC002542.1-201ENST00000440683 193 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 RPL21P41-201ENST00000459863 264 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 RN7SL807P-201ENST00000470923 297 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 RPL7P49-201ENST00000471402 708 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 MTND3P3-201ENST00000505004 126 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 SNORA19.3-201ENST00000516165 130 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 AP004371.1-201ENST00000525240 214 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 AC087897.1-201ENST00000550134 156 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 AC053481.3-201ENST00000577881 843 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 OR4G1P-201ENST00000588632 938 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 AC083760.1-201ENST00000589621 670 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 CCDC58P3-201ENST00000590792 430 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 AL109653.1-201ENST00000603091 248 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 AC124016.2-201ENST00000610058 665 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 AC100793.4-201ENST00000613683 429 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 AC099506.2-201ENST00000623074 221 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 AC018692.3-201ENST00000623929 123 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
RTN4IP1Q8WWV3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.53□□□□□ -2.01
RTN4IP1Q8WWV3 PABPC1P7-201ENST00000413177 1513 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 MTND5P31-201ENST00000419366 1374 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 MTND5P1-201ENST00000445440 1375 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 ZNF37BP-203ENST00000452306 1352 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 RNU6-263P-201ENST00000363811 107 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 RNU6-374P-201ENST00000364146 108 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 RNU6-1181P-201ENST00000384191 106 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 RNU6-549P-201ENST00000384433 107 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AL136133.1-201ENST00000413694 376 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 FCF1P2-201ENST00000415284 583 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 RPS3AP9-201ENST00000417027 792 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AL390023.1-201ENST00000428836 262 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 YWHAZP7-201ENST00000436906 631 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AL592437.1-201ENST00000443781 492 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 MTND2P39-201ENST00000457230 764 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 SYPL1P1-201ENST00000473622 768 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AC118282.2-201ENST00000508739 374 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AC048346.1-201ENST00000510247 144 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 MTCYBP37-201ENST00000510642 1133 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 snoZ278.1-201ENST00000517059 112 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AC087894.1-201ENST00000538359 518 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AC044913.1-201ENST00000557200 430 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 TMF1P1-201ENST00000576058 373 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AC126365.2-201ENST00000580630 379 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 PRELID3BP8-201ENST00000604148 295 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AC105227.2-201ENST00000615075 605 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AL138955.1-201ENST00000622881 1040 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms