Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AL391156.1-201ENST00000554965 554 ntBASIC2.57□□□□□ -2
LMX1AQ8TE12 AC091544.4-201ENST00000555268 342 ntBASIC2.57□□□□□ -2
LMX1AQ8TE12 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.57□□□□□ -2
LMX1AQ8TE12 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.57□□□□□ -2
LMX1AQ8TE12 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.57□□□□□ -2
LMX1AQ8TE12 AC104984.5-201ENST00000586878 94 ntBASIC2.57□□□□□ -2
LMX1AQ8TE12 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.57□□□□□ -2
LMX1AQ8TE12 NTAN1P1-201ENST00000603150 646 ntBASIC2.57□□□□□ -2
LMX1AQ8TE12 HMGN2P28-201ENST00000606102 262 ntBASIC2.57□□□□□ -2
LMX1AQ8TE12 AL355802.4-201ENST00000607635 548 ntBASIC2.57□□□□□ -2
LMX1AQ8TE12 AC004832.5-201ENST00000608677 401 ntBASIC2.57□□□□□ -2
LMX1AQ8TE12 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.57□□□□□ -2
LMX1AQ8TE12 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.57□□□□□ -2
LMX1AQ8TE12 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.57□□□□□ -2
LMX1AQ8TE12 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LMX1AQ8TE12 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.57□□□□□ -2
LMX1AQ8TE12 PABPC1P7-201ENST00000413177 1513 ntBASIC2.57□□□□□ -2
LMX1AQ8TE12 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.57□□□□□ -2
LMX1AQ8TE12 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.57□□□□□ -2
LMX1AQ8TE12 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
LMX1AQ8TE12 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.56□□□□□ -2
LMX1AQ8TE12 SNORD51.1-201ENST00000365405 77 ntBASIC2.56□□□□□ -2
LMX1AQ8TE12 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
LMX1AQ8TE12 RSL24D1P4-201ENST00000400938 484 ntBASIC2.56□□□□□ -2
LMX1AQ8TE12 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.56□□□□□ -2
LMX1AQ8TE12 RN7SKP123-201ENST00000410732 291 ntBASIC2.56□□□□□ -2
LMX1AQ8TE12 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.56□□□□□ -2
LMX1AQ8TE12 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.56□□□□□ -2
LMX1AQ8TE12 RPLP0P7-201ENST00000416050 667 ntBASIC2.56□□□□□ -2
LMX1AQ8TE12 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.56□□□□□ -2
LMX1AQ8TE12 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.56□□□□□ -2
LMX1AQ8TE12 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.56□□□□□ -2
LMX1AQ8TE12 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.56□□□□□ -2
LMX1AQ8TE12 MTND2P21-201ENST00000436242 1042 ntBASIC2.56□□□□□ -2
LMX1AQ8TE12 RPL7P29-201ENST00000437151 728 ntBASIC2.56□□□□□ -2
LMX1AQ8TE12 RPL7P36-201ENST00000444633 681 ntBASIC2.56□□□□□ -2
LMX1AQ8TE12 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.56□□□□□ -2
LMX1AQ8TE12 SRIP1-201ENST00000489235 288 ntBASIC2.56□□□□□ -2
LMX1AQ8TE12 AC118282.1-201ENST00000506408 765 ntBASIC2.56□□□□□ -2
LMX1AQ8TE12 AC119751.1-201ENST00000513357 765 ntBASIC2.56□□□□□ -2
LMX1AQ8TE12 RPL7P20-201ENST00000520308 745 ntBASIC2.56□□□□□ -2
LMX1AQ8TE12 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.56□□□□□ -2
LMX1AQ8TE12 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.56□□□□□ -2
LMX1AQ8TE12 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.56□□□□□ -2
LMX1AQ8TE12 SERPINE4P-201ENST00000554978 281 ntBASIC2.56□□□□□ -2
LMX1AQ8TE12 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.56□□□□□ -2
LMX1AQ8TE12 AC027176.1-201ENST00000560204 514 ntBASIC2.56□□□□□ -2
LMX1AQ8TE12 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.56□□□□□ -2
LMX1AQ8TE12 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
LMX1AQ8TE12 MTND5P7-201ENST00000413558 1798 ntBASIC2.56□□□□□ -2
LMX1AQ8TE12 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.56□□□□□ -2
LMX1AQ8TE12 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.56□□□□□ -2
LMX1AQ8TE12 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
LMX1AQ8TE12 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.56□□□□□ -2
LMX1AQ8TE12 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
LMX1AQ8TE12 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.55□□□□□ -2
LMX1AQ8TE12 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LMX1AQ8TE12 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
LMX1AQ8TE12 XGY1-201ENST00000381172 446 ntBASIC2.55□□□□□ -2
LMX1AQ8TE12 MTCYBP24-201ENST00000420387 1106 ntBASIC2.55□□□□□ -2
LMX1AQ8TE12 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.55□□□□□ -2
LMX1AQ8TE12 DPPA2P1-201ENST00000428060 556 ntBASIC2.55□□□□□ -2
LMX1AQ8TE12 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.55□□□□□ -2
LMX1AQ8TE12 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.55□□□□□ -2
LMX1AQ8TE12 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.55□□□□□ -2
LMX1AQ8TE12 AC006483.1-201ENST00000487308 313 ntBASIC2.55□□□□□ -2
LMX1AQ8TE12 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.55□□□□□ -2
LMX1AQ8TE12 RPL23AP55-201ENST00000498163 452 ntBASIC2.55□□□□□ -2
LMX1AQ8TE12 MTCO2P32-201ENST00000514865 403 ntBASIC2.55□□□□□ -2
LMX1AQ8TE12 SNORA48.9-201ENST00000516419 162 ntBASIC2.55□□□□□ -2
LMX1AQ8TE12 RN7SKP283-201ENST00000517197 270 ntBASIC2.55□□□□□ -2
LMX1AQ8TE12 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.55□□□□□ -2
LMX1AQ8TE12 AP003717.3-201ENST00000544832 1180 ntBASIC2.55□□□□□ -2
LMX1AQ8TE12 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.55□□□□□ -2
LMX1AQ8TE12 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.55□□□□□ -2
LMX1AQ8TE12 AC055876.1-202ENST00000567053 138 ntBASIC2.55□□□□□ -2
LMX1AQ8TE12 ATP5F1P7-201ENST00000567330 760 ntBASIC2.55□□□□□ -2
LMX1AQ8TE12 AC004775.1-201ENST00000607389 753 ntBASIC2.55□□□□□ -2
LMX1AQ8TE12 AL451074.6-201ENST00000608512 729 ntBASIC2.55□□□□□ -2
LMX1AQ8TE12 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
LMX1AQ8TE12 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.55□□□□□ -2
LMX1AQ8TE12 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.55□□□□□ -2
LMX1AQ8TE12 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.55□□□□□ -2
LMX1AQ8TE12 AC004925.1-201ENST00000624256 2706 ntBASIC2.55□□□□□ -2
LMX1AQ8TE12 MTND5P19-201ENST00000424872 1794 ntBASIC2.54□□□□□ -2
LMX1AQ8TE12 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.54□□□□□ -2
LMX1AQ8TE12 RNU6-252P-201ENST00000363232 107 ntBASIC2.54□□□□□ -2
LMX1AQ8TE12 RNVU1-3-201ENST00000364313 161 ntBASIC2.54□□□□□ -2
LMX1AQ8TE12 AL138880.1-201ENST00000405824 642 ntBASIC2.54□□□□□ -2
LMX1AQ8TE12 MIR1250-201ENST00000408098 113 ntBASIC2.54□□□□□ -2
LMX1AQ8TE12 AC023128.2-201ENST00000420880 1223 ntBASIC2.54□□□□□ -2
LMX1AQ8TE12 MTND4P24-201ENST00000424002 397 ntBASIC2.54□□□□□ -2
LMX1AQ8TE12 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.54□□□□□ -2
LMX1AQ8TE12 AC005517.2-201ENST00000424673 553 ntBASIC2.54□□□□□ -2
LMX1AQ8TE12 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.54□□□□□ -2
LMX1AQ8TE12 FO393419.3-201ENST00000428741 282 ntBASIC2.54□□□□□ -2
LMX1AQ8TE12 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.54□□□□□ -2
LMX1AQ8TE12 HIGD1AP11-201ENST00000438361 280 ntBASIC2.54□□□□□ -2
LMX1AQ8TE12 AC114878.1-201ENST00000441166 358 ntBASIC2.54□□□□□ -2
LMX1AQ8TE12 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms