Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AC107954.1-201ENST00000565906 727 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AC091489.2-201ENST00000566263 604 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AC090615.1-201ENST00000577519 154 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AC012417.1-201ENST00000582307 1039 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 MIR544B-201ENST00000582372 78 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AL669831.4-202ENST00000590817 238 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AC005255.1-201ENST00000593748 216 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AC020914.4-201ENST00000597690 277 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 PRELID3BP8-201ENST00000604148 295 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AL391497.1-201ENST00000608671 547 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AC006329.2-201ENST00000611491 394 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AL596245.1-201ENST00000618994 362 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AC008785.1-201ENST00000624475 456 ntBASIC3.72□□□□□ -1.81
BEST3Q8N1M1 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
BEST3Q8N1M1 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
BEST3Q8N1M1 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.81
BEST3Q8N1M1 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
BEST3Q8N1M1 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 AL390237.1-201ENST00000404226 1415 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 Y_RNA.318-201ENST00000365131 97 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 RNU6-821P-201ENST00000390995 107 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 RN7SKP159-201ENST00000410657 292 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 MTCO1P17-201ENST00000411522 491 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 PGBD4P8-201ENST00000412993 562 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 AC109780.2-201ENST00000413467 845 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 EZH2P1-201ENST00000431167 291 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 AC010153.1-201ENST00000432862 727 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 COX6CP12-201ENST00000446748 202 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 MTCO2P18-201ENST00000457151 658 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 RPL21P129-201ENST00000491732 478 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 AC091965.2-201ENST00000512324 613 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 AC093677.1-201ENST00000514414 678 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 AC060788.1-201ENST00000521318 469 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 AC007115.1-201ENST00000546853 234 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 HSPE1P5-201ENST00000561489 272 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 AC074050.1-201ENST00000563247 211 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 MIR5685-201ENST00000579080 79 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 AC073544.2-201ENST00000601155 540 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 RN7SKP299-201ENST00000606679 301 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 AC006065.5-201ENST00000623427 349 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 AP005264.7-201ENST00000625003 745 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 MTND5P3-201ENST00000438536 1800 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 MTND4P4-201ENST00000439033 1366 ntBASIC3.71□□□□□ -1.82
BEST3Q8N1M1 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
BEST3Q8N1M1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 AC006378.2-201ENST00000623178 2476 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 RNU6-989P-201ENST00000362756 107 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms