Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 ZNF37BP-203ENST00000452306 1352 ntBASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 AL136520.1-201ENST00000600311 1322 ntBASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 RNA5SP374-201ENST00000362939 125 ntBASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 SNORD46.1-201ENST00000364139 104 ntBASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 OFD1P18Y-201ENST00000420889 959 ntBASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 AC114973.1-201ENST00000429057 632 ntBASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 UBE2V1P6-201ENST00000430840 422 ntBASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 AC002542.1-201ENST00000440683 193 ntBASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 RPL7P23-201ENST00000493874 747 ntBASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 AC098799.1-201ENST00000504752 800 ntBASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 AC011352.3-201ENST00000505162 593 ntBASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 AC104057.1-201ENST00000515547 497 ntBASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 RNU6-1073P-201ENST00000517182 106 ntBASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 AC012493.2-201ENST00000595083 291 ntBASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 AC007566.2-201ENST00000603642 413 ntBASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 RPL21P136-201ENST00000605378 396 ntBASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 AC073348.1-201ENST00000623002 331 ntBASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 AC093875.1-201ENST00000623688 504 ntBASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 AC098679.5-201ENST00000624394 571 ntBASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC65Q8IXS2 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 OR1L1-202ENST00000373686 1083 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 DEFB109C-201ENST00000382575 264 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 DEFB109B-201ENST00000382656 264 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 U6.112-201ENST00000384129 70 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 SFR1P1-201ENST00000403720 688 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 RNU6-1077P-201ENST00000410506 102 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 RNU6-575P-201ENST00000411326 105 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 AC109780.2-201ENST00000413467 845 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 TOMM22P1-201ENST00000418578 312 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 MTCYBP24-201ENST00000420387 1106 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 AC109583.1-201ENST00000432156 268 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 RPL27AP5-201ENST00000469428 449 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 RPS17P11-201ENST00000474297 293 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 RPS29P2-201ENST00000479278 136 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 SLC25A15P5-201ENST00000508033 253 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 AC119751.1-201ENST00000513357 765 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 AC104986.1-201ENST00000517978 436 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 AC006518.2-201ENST00000542513 940 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 MTND4LP25-201ENST00000570218 163 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 AC006539.2-201ENST00000601729 572 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 BNIP3P11-201ENST00000603878 563 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 AL627309.6-201ENST00000606857 840 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 AC096577.2-201ENST00000611455 153 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 AC078880.5-201ENST00000617845 421 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 LRRC77P-213ENST00000637727 880 ntBASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CCDC65Q8IXS2 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 RNU6-468P-201ENST00000384003 109 ntBASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 RNU6-921P-201ENST00000384361 107 ntBASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 RNA5SP129-201ENST00000410276 118 ntBASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 TAF13P2-201ENST00000416876 286 ntBASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 ATG3P1-201ENST00000419507 911 ntBASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 AC027644.1-201ENST00000419595 298 ntBASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 SFR1P2-201ENST00000421841 730 ntBASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 AC233981.1-201ENST00000423224 461 ntBASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 USP9YP36-201ENST00000424581 829 ntBASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 RPL31P54-201ENST00000429803 370 ntBASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC65Q8IXS2 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms