Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.01□□□□□ -1.93
SKA3Q8IX90 PLGLA-201ENST00000465668 449 ntBASIC3.01□□□□□ -1.93
SKA3Q8IX90 AC092757.1-201ENST00000467293 467 ntBASIC3.01□□□□□ -1.93
SKA3Q8IX90 AC108860.1-201ENST00000484521 383 ntBASIC3.01□□□□□ -1.93
SKA3Q8IX90 KLRA1P-201ENST00000503499 986 ntBASIC3.01□□□□□ -1.93
SKA3Q8IX90 AC093767.1-201ENST00000504523 156 ntBASIC3.01□□□□□ -1.93
SKA3Q8IX90 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.01□□□□□ -1.93
SKA3Q8IX90 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.01□□□□□ -1.93
SKA3Q8IX90 SNORA64.4-201ENST00000516632 81 ntBASIC3.01□□□□□ -1.93
SKA3Q8IX90 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.01□□□□□ -1.93
SKA3Q8IX90 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.01□□□□□ -1.93
SKA3Q8IX90 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.01□□□□□ -1.93
SKA3Q8IX90 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.01□□□□□ -1.93
SKA3Q8IX90 AC125611.1-201ENST00000549563 229 ntBASIC3.01□□□□□ -1.93
SKA3Q8IX90 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.01□□□□□ -1.93
SKA3Q8IX90 AC023813.2-201ENST00000564321 469 ntBASIC3.01□□□□□ -1.93
SKA3Q8IX90 MIR1254-2-201ENST00000579553 63 ntBASIC3.01□□□□□ -1.93
SKA3Q8IX90 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
SKA3Q8IX90 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.01□□□□□ -1.93
SKA3Q8IX90 AL035411.2-201ENST00000604022 421 ntBASIC3.01□□□□□ -1.93
SKA3Q8IX90 DUXAP10-204ENST00000612052 616 ntBASIC3.01□□□□□ -1.93
SKA3Q8IX90 AC073968.1-201ENST00000618594 637 ntBASIC3.01□□□□□ -1.93
SKA3Q8IX90 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.01□□□□□ -1.93
SKA3Q8IX90 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.01□□□□□ -1.93
SKA3Q8IX90 AC008264.2-201ENST00000610193 3731 ntBASIC3.01□□□□□ -1.93
SKA3Q8IX90 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.01□□□□□ -1.93
SKA3Q8IX90 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
SKA3Q8IX90 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SKA3Q8IX90 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SKA3Q8IX90 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SKA3Q8IX90 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SKA3Q8IX90 RNU6-335P-201ENST00000364563 113 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 AC016769.3-201ENST00000396562 315 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 EIF5P1-201ENST00000400019 1231 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 AL121972.1-201ENST00000402023 252 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 RN7SKP123-201ENST00000410732 291 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3□□□□□ -1.93
SKA3Q8IX90 AC069157.1-201ENST00000421749 137 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3□□□□□ -1.93
SKA3Q8IX90 OFD1P12Y-201ENST00000427963 1207 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 OFD1P13Y-201ENST00000431179 1232 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 RPL21P112-201ENST00000434403 463 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 AL590103.1-201ENST00000434488 307 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3□□□□□ -1.93
SKA3Q8IX90 TRIM60P18-201ENST00000441518 828 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 VN1R10P-201ENST00000447106 875 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 ZNF886P-201ENST00000450781 723 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 AC104308.1-201ENST00000454621 333 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3□□□□□ -1.93
SKA3Q8IX90 RPL31P13-201ENST00000484151 370 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 RPL23AP55-201ENST00000498163 452 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 AC108078.3-201ENST00000502633 489 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3□□□□□ -1.93
SKA3Q8IX90 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3□□□□□ -1.93
SKA3Q8IX90 IGKV2-26-201ENST00000518305 343 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3□□□□□ -1.93
SKA3Q8IX90 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3□□□□□ -1.93
SKA3Q8IX90 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3□□□□□ -1.93
SKA3Q8IX90 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3□□□□□ -1.93
SKA3Q8IX90 MTCYBP41-201ENST00000528913 1123 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 AP000619.3-201ENST00000535634 1127 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 AC007458.1-201ENST00000542812 373 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3□□□□□ -1.93
SKA3Q8IX90 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3□□□□□ -1.93
SKA3Q8IX90 LARP7P2-201ENST00000575306 125 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3□□□□□ -1.93
SKA3Q8IX90 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3□□□□□ -1.93
SKA3Q8IX90 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3□□□□□ -1.93
SKA3Q8IX90 SNRPGP15-201ENST00000600149 222 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 AC006557.5-201ENST00000603126 811 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 AC021749.1-201ENST00000604322 607 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 AC106052.1-201ENST00000608029 497 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 AC090425.2-201ENST00000608818 501 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 AL159169.3-201ENST00000608871 561 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
SKA3Q8IX90 AC005332.6-201ENST00000613178 446 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3□□□□□ -1.93
SKA3Q8IX90 AC073348.1-201ENST00000623002 331 ntBASIC3□□□□□ -1.93
SKA3Q8IX90 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3□□□□□ -1.93
SKA3Q8IX90 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3□□□□□ -1.93
SKA3Q8IX90 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SKA3Q8IX90 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3□□□□□ -1.93
SKA3Q8IX90 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SKA3Q8IX90 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
SKA3Q8IX90 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.99□□□□□ -1.93
SKA3Q8IX90 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SKA3Q8IX90 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
SKA3Q8IX90 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SKA3Q8IX90 RNA5SP295-201ENST00000362655 121 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 RNU4-68P-201ENST00000364314 141 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 Y_RNA.408-201ENST00000383987 102 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 RNU6-906P-201ENST00000384700 70 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 MIR506-201ENST00000384998 124 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 MIR607-201ENST00000385241 96 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 RNU6-837P-201ENST00000391056 108 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 AL136310.1-201ENST00000404926 654 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC245052.5-201ENST00000416320 649 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC244098.2-201ENST00000422068 99 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms