Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 AC093775.1-201ENST00000624154 1868 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 AC091046.3-201ENST00000631455 1574 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 RNVU1-3-201ENST00000364313 161 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 RNU6-1227P-201ENST00000383981 107 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 SNORD37.1-201ENST00000390968 65 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 NDUFB4P5-201ENST00000415445 361 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 MTCO3P46-201ENST00000425787 232 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 AC093156.1-201ENST00000440382 670 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 AL450023.3-201ENST00000440592 271 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 AC073415.1-201ENST00000449240 153 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 AL353691.1-201ENST00000451332 387 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 AL356010.1-201ENST00000456364 102 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 RN7SL591P-201ENST00000496150 292 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 CDH12P4-201ENST00000517835 295 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 CDH12P3-201ENST00000517935 295 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 CDH12P1-201ENST00000518435 295 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 IGLVIV-53-201ENST00000520107 367 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 OR5B10P-201ENST00000532869 642 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 AC068831.4-201ENST00000556118 109 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 MIR4700-201ENST00000578311 74 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 AC022432.1-201ENST00000595739 310 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 AC103710.2-201ENST00000609912 942 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 AC019278.1-201ENST00000623516 479 ntBASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM48Q8IWZ4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 Y_RNA.22-201ENST00000362492 102 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 Y_RNA.162-201ENST00000363683 102 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 RNU5A-8P-201ENST00000364102 114 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 SNORA51.2-201ENST00000364595 132 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 RNU4-48P-201ENST00000365559 182 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 RNU6-606P-201ENST00000384721 111 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 TBCAP2-201ENST00000416175 326 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 SRIP2-201ENST00000428470 166 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 AC024082.2-201ENST00000434771 238 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 IFNA20P-201ENST00000436840 528 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 RPL21P89-201ENST00000444021 467 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 DDX3P2-201ENST00000446138 111 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 MTND3P16-201ENST00000452205 344 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 AC007537.2-201ENST00000472093 511 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 RPL5P22-201ENST00000480199 884 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 RPL38P4-201ENST00000502376 214 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 COX7A2P2-201ENST00000505291 250 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 AC004062.1-201ENST00000509926 645 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 RNU4-49P-201ENST00000516080 140 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 RNU6-1314P-201ENST00000517139 104 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 SUMO2P20-201ENST00000520803 283 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 AP003072.1-201ENST00000531740 145 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 AL442663.2-201ENST00000554385 511 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 RPL21P12-201ENST00000559810 515 ntBASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.78□□□□□ -1.64
TRIM48Q8IWZ4 AL390726.5-202ENST00000564800 256 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms