Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RNU7-143P-201ENST00000516781 65 ntBASIC4.28□□□□□ -1.72
HERC6Q8IVU3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 AC087276.1-201ENST00000529659 480 ntBASIC4.28□□□□□ -1.72
HERC6Q8IVU3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.28□□□□□ -1.72
HERC6Q8IVU3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 AC011471.1-201ENST00000585766 187 ntBASIC4.28□□□□□ -1.72
HERC6Q8IVU3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 AC121247.2-201ENST00000604776 136 ntBASIC4.28□□□□□ -1.72
HERC6Q8IVU3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.28□□□□□ -1.72
HERC6Q8IVU3 MIR7975-201ENST00000619350 68 ntBASIC4.28□□□□□ -1.72
HERC6Q8IVU3 AC008443.7-201ENST00000622195 246 ntBASIC4.28□□□□□ -1.72
HERC6Q8IVU3 MIR3974-201ENST00000637126 96 ntBASIC4.28□□□□□ -1.72
HERC6Q8IVU3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.28□□□□□ -1.72
HERC6Q8IVU3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AP002001.2-201ENST00000529025 1469 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 RNU6-1249P-201ENST00000363237 111 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 U1.1-201ENST00000384101 164 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 Y_RNA.560-201ENST00000384689 102 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 RNVU1-14-201ENST00000384770 164 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AC007066.1-201ENST00000392902 381 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AL031577.2-201ENST00000404133 280 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 NDUFB4P4-201ENST00000404822 243 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 RN7SKP177-201ENST00000410567 355 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 Z92545.1-201ENST00000411782 234 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 EI24P1-201ENST00000416584 867 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AC244098.2-201ENST00000422068 99 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AC007742.1-201ENST00000425789 329 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AL591419.1-201ENST00000427423 339 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 NANOGP6-201ENST00000429190 847 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 ELOCP26-201ENST00000436067 329 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AC002381.1-201ENST00000447049 280 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AL133162.1-201ENST00000463228 453 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 RPS3AP43-201ENST00000479743 781 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AC106707.2-201ENST00000484182 374 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 POU5F1P7-201ENST00000508759 541 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 LTV1P1-201ENST00000510683 1237 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AC104619.4-201ENST00000510773 249 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 Vault.1-201ENST00000516474 102 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 SCARNA14-201ENST00000516903 136 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AC007991.1-201ENST00000522680 631 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 OR5M7P-201ENST00000526140 972 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 RPL21P12-201ENST00000559810 515 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AC012182.1-201ENST00000570133 895 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 SNORD84-203ENST00000584275 78 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 MIR3922-201ENST00000585192 84 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AC004223.2-201ENST00000590309 544 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AC128687.1-201ENST00000605304 619 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AL596245.1-201ENST00000618994 362 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AC091931.1-201ENST00000623488 728 ntBASIC4.27□□□□□ -1.73
HERC6Q8IVU3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.27□□□□□ -1.73
HERC6Q8IVU3 AC244517.1-201ENST00000606030 2086 ntBASIC4.26□□□□□ -1.73
HERC6Q8IVU3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 RNU6-500P-201ENST00000362349 107 ntBASIC4.26□□□□□ -1.73
HERC6Q8IVU3 RNA5SP258-201ENST00000362750 119 ntBASIC4.26□□□□□ -1.73
HERC6Q8IVU3 RNA5SP399-201ENST00000364003 117 ntBASIC4.26□□□□□ -1.73
HERC6Q8IVU3 RNU6-289P-201ENST00000364093 107 ntBASIC4.26□□□□□ -1.73
HERC6Q8IVU3 MIR634-201ENST00000385208 97 ntBASIC4.26□□□□□ -1.73
HERC6Q8IVU3 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 RN7SKP266-201ENST00000410232 287 ntBASIC4.26□□□□□ -1.73
HERC6Q8IVU3 RPS7P15-201ENST00000415804 584 ntBASIC4.26□□□□□ -1.73
HERC6Q8IVU3 MTCO3P12-201ENST00000416718 547 ntBASIC4.26□□□□□ -1.73
HERC6Q8IVU3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.26□□□□□ -1.73
HERC6Q8IVU3 USP9YP7-201ENST00000436723 430 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms