Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 HSPA8P18-201ENST00000439846 1928 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 OR9K1P-202ENST00000641111 3217 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.91□□□□□ -1.62
ATG4DQ86TL0 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4DQ86TL0 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
ATG4DQ86TL0 AL121950.1-201ENST00000624993 2077 ntBASIC4.9□□□□□ -1.62
ATG4DQ86TL0 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
ATG4DQ86TL0 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
ATG4DQ86TL0 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.9□□□□□ -1.62
ATG4DQ86TL0 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.9□□□□□ -1.62
ATG4DQ86TL0 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
ATG4DQ86TL0 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.9□□□□□ -1.62
ATG4DQ86TL0 MIR133A2-201ENST00000347538 102 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 RNU6-562P-201ENST00000362731 107 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 RNU6-82P-201ENST00000363970 107 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
ATG4DQ86TL0 RNU6-746P-201ENST00000384112 109 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 RNU6-921P-201ENST00000384361 107 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 RNA5SP241-201ENST00000391326 114 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 AC008280.1-201ENST00000418851 412 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 CBX1P4-201ENST00000439415 457 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 AC105399.1-202ENST00000447303 205 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 AL162388.1-201ENST00000450912 352 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 CBX1P2-201ENST00000453841 458 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.9□□□□□ -1.63
ATG4DQ86TL0 RN7SL515P-201ENST00000463999 297 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 FO393415.2-201ENST00000480085 343 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 SNORA70.11-201ENST00000515987 138 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 SNORA70.13-201ENST00000516116 138 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 RNU6-111P-201ENST00000517179 105 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 AC022868.1-201ENST00000517767 391 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 AC027308.1-201ENST00000517993 110 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.9□□□□□ -1.63
ATG4DQ86TL0 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.9□□□□□ -1.63
ATG4DQ86TL0 DEFB109D-201ENST00000529497 240 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.9□□□□□ -1.63
ATG4DQ86TL0 OR11H5P-201ENST00000554039 926 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.9□□□□□ -1.63
ATG4DQ86TL0 RN7SL290P-201ENST00000578661 300 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 AC011477.5-201ENST00000586571 259 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 AL512782.1-201ENST00000603093 364 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 MTND4LP5-201ENST00000605152 292 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.9□□□□□ -1.63
ATG4DQ86TL0 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.9□□□□□ -1.63
ATG4DQ86TL0 AL627230.1-201ENST00000613077 211 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.9□□□□□ -1.63
ATG4DQ86TL0 AC109583.2-201ENST00000617367 129 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 AC091903.1-201ENST00000624322 454 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 U6.114-201ENST00000636407 96 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.9□□□□□ -1.63
ATG4DQ86TL0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ATG4DQ86TL0 AL078621.3-201ENST00000623707 2042 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 AC235565.1-201ENST00000456962 1325 ntBASIC4.9□□□□□ -1.63
ATG4DQ86TL0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.9□□□□□ -1.63
ATG4DQ86TL0 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
ATG4DQ86TL0 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
ATG4DQ86TL0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
ATG4DQ86TL0 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 OR55B1P-203ENST00000641518 2602 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 CASC19-204ENST00000641001 2055 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AL353796.1-201ENST00000561542 3241 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AL121839.2-201ENST00000565058 6943 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 Y_RNA.180-201ENST00000363867 113 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 Y_RNA.376-201ENST00000365638 108 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 SNORA51.6-201ENST00000384151 125 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 RNU6-432P-201ENST00000384196 109 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 SNORA48.4-201ENST00000391089 134 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AC079809.1-201ENST00000415468 276 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AL590632.1-201ENST00000424289 371 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 PRUNEP1-201ENST00000425846 705 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 GSTM5P1-201ENST00000434751 660 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.89□□□□□ -1.63
ATG4DQ86TL0 FTH1P1-201ENST00000437933 532 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 AC104332.1-201ENST00000440471 797 ntBASIC4.89□□□□□ -1.63
ATG4DQ86TL0 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms