Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 AL590632.1-201ENST00000424289 371 ntBASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 HIGD1AP11-201ENST00000438361 280 ntBASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 CEACAMP7-201ENST00000444105 496 ntBASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 SNORD121B-201ENST00000458838 81 ntBASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 SNORD127-201ENST00000458892 86 ntBASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 DEFB109F-201ENST00000491870 277 ntBASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 AC026801.1-201ENST00000497178 464 ntBASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 AL133153.1-201ENST00000557756 303 ntBASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 MIR4646-201ENST00000580775 63 ntBASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 AC012443.1-201ENST00000605605 231 ntBASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 AC007938.2-201ENST00000604666 2634 ntBASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SH3RF1Q7Z6J0 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 Y_RNA.60-201ENST00000362831 98 ntBASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 Y_RNA.180-201ENST00000363867 113 ntBASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 AL109941.1-201ENST00000401925 229 ntBASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 RNU6-293P-201ENST00000411259 106 ntBASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 FAR2P4-202ENST00000425399 584 ntBASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 NDUFB4P8-201ENST00000435351 367 ntBASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 AC104332.1-201ENST00000440471 797 ntBASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 AZGP1P2-201ENST00000454506 345 ntBASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 AL353752.1-201ENST00000454946 260 ntBASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 AC026979.1-201ENST00000492525 396 ntBASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 SNORA14.1-201ENST00000516113 141 ntBASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 RNU6-1092P-201ENST00000516955 87 ntBASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 RNU6-182P-201ENST00000516970 105 ntBASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 AC126177.5-201ENST00000549599 178 ntBASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 AC090115.3-201ENST00000553218 849 ntBASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 MTND4LP5-201ENST00000605152 292 ntBASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 SNORD58B-201ENST00000607313 66 ntBASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 AL138825.1-201ENST00000618587 192 ntBASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.32□□□□□ -1.4
SH3RF1Q7Z6J0 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 GABPAP-201ENST00000419271 1356 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 U3.2-201ENST00000362981 210 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 Y_RNA.106-201ENST00000363189 100 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 RNU6-960P-201ENST00000364056 120 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 SNORD82-201ENST00000365530 70 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 RPLP0P7-201ENST00000416050 667 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 AL358176.3-201ENST00000420757 454 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 AC139712.2-201ENST00000424302 339 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 TMEM183AP1-205ENST00000432739 290 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 MRPS18BP2-201ENST00000434310 759 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 RPL21P2-201ENST00000440049 481 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 AL121871.1-201ENST00000443413 436 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms