Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL353597.2-202ENST00000434901 373 ntBASIC1.7□□□□□ -2.14
VPS13CQ709C8 CACYBPP1-201ENST00000438592 684 ntBASIC1.7□□□□□ -2.14
VPS13CQ709C8 RPS29P12-201ENST00000460178 152 ntBASIC1.7□□□□□ -2.14
VPS13CQ709C8 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC1.7□□□□□ -2.14
VPS13CQ709C8 AC005296.1-201ENST00000616145 209 ntBASIC1.7□□□□□ -2.14
VPS13CQ709C8 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
VPS13CQ709C8 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
VPS13CQ709C8 AL139811.1-201ENST00000424779 2299 ntBASIC1.7□□□□□ -2.14
VPS13CQ709C8 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC1.7□□□□□ -2.14
VPS13CQ709C8 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.7□□□□□ -2.14
VPS13CQ709C8 MIR6504-201ENST00000613520 61 ntBASIC1.7□□□□□ -2.14
VPS13CQ709C8 Z99129.2-201ENST00000619967 314 ntBASIC1.7□□□□□ -2.14
VPS13CQ709C8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
VPS13CQ709C8 RNY1-201ENST00000364228 113 ntBASIC1.7□□□□□ -2.14
VPS13CQ709C8 AMD1P2-201ENST00000412936 992 ntBASIC1.7□□□□□ -2.14
VPS13CQ709C8 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.7□□□□□ -2.14
VPS13CQ709C8 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.7□□□□□ -2.14
VPS13CQ709C8 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.7□□□□□ -2.14
VPS13CQ709C8 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.7□□□□□ -2.14
VPS13CQ709C8 MTND5P23-201ENST00000430812 1655 ntBASIC1.69□□□□□ -2.14
VPS13CQ709C8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
VPS13CQ709C8 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
VPS13CQ709C8 AC005005.2-201ENST00000420779 380 ntBASIC1.69□□□□□ -2.14
VPS13CQ709C8 AL356806.1-201ENST00000422524 916 ntBASIC1.69□□□□□ -2.14
VPS13CQ709C8 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC1.69□□□□□ -2.14
VPS13CQ709C8 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC1.69□□□□□ -2.14
VPS13CQ709C8 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.69□□□□□ -2.14
VPS13CQ709C8 HSP90AA5P-201ENST00000438353 2192 ntBASIC1.69□□□□□ -2.14
VPS13CQ709C8 DCAF13P1-201ENST00000495256 1330 ntBASIC1.69□□□□□ -2.14
VPS13CQ709C8 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC1.69□□□□□ -2.14
VPS13CQ709C8 KPNA2P1-201ENST00000458289 1591 ntBASIC1.69□□□□□ -2.14
VPS13CQ709C8 U8.8-201ENST00000365399 135 ntBASIC1.69□□□□□ -2.14
VPS13CQ709C8 AC004965.1-201ENST00000413033 213 ntBASIC1.69□□□□□ -2.14
VPS13CQ709C8 AC234782.4-201ENST00000417646 1048 ntBASIC1.69□□□□□ -2.14
VPS13CQ709C8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.69□□□□□ -2.14
VPS13CQ709C8 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.69□□□□□ -2.14
VPS13CQ709C8 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC1.69□□□□□ -2.14
VPS13CQ709C8 MIR6895-201ENST00000613497 78 ntBASIC1.69□□□□□ -2.14
VPS13CQ709C8 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC1.69□□□□□ -2.14
VPS13CQ709C8 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
VPS13CQ709C8 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC1.69□□□□□ -2.14
VPS13CQ709C8 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
VPS13CQ709C8 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
VPS13CQ709C8 Y_RNA.354-201ENST00000365448 111 ntBASIC1.69□□□□□ -2.14
VPS13CQ709C8 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
VPS13CQ709C8 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.69□□□□□ -2.14
VPS13CQ709C8 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC1.69□□□□□ -2.14
VPS13CQ709C8 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
VPS13CQ709C8 MIR219B-201ENST00000637023 88 ntBASIC1.69□□□□□ -2.14
VPS13CQ709C8 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
VPS13CQ709C8 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
VPS13CQ709C8 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.68□□□□□ -2.14
VPS13CQ709C8 FGF7P3-201ENST00000454645 303 ntBASIC1.68□□□□□ -2.14
VPS13CQ709C8 RPL9P33-201ENST00000484311 566 ntBASIC1.68□□□□□ -2.14
VPS13CQ709C8 OR52A4P-203ENST00000498233 1014 ntBASIC1.68□□□□□ -2.14
VPS13CQ709C8 RPS27P27-201ENST00000498779 255 ntBASIC1.68□□□□□ -2.14
VPS13CQ709C8 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
VPS13CQ709C8 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
VPS13CQ709C8 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
VPS13CQ709C8 AP005901.5-201ENST00000545779 1796 ntBASIC1.68□□□□□ -2.14
VPS13CQ709C8 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
VPS13CQ709C8 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC1.68□□□□□ -2.14
VPS13CQ709C8 U8.10-201ENST00000384260 133 ntBASIC1.68□□□□□ -2.14
VPS13CQ709C8 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS13CQ709C8 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS13CQ709C8 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS13CQ709C8 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS13CQ709C8 AC095038.3-201ENST00000634439 195 ntBASIC1.68□□□□□ -2.14
VPS13CQ709C8 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.68□□□□□ -2.14
VPS13CQ709C8 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.68□□□□□ -2.14
VPS13CQ709C8 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
VPS13CQ709C8 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS13CQ709C8 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC1.68□□□□□ -2.14
VPS13CQ709C8 AC245517.2-201ENST00000442890 346 ntBASIC1.68□□□□□ -2.14
VPS13CQ709C8 AC034244.1-201ENST00000507687 207 ntBASIC1.68□□□□□ -2.14
VPS13CQ709C8 PDCL2P2-201ENST00000533651 189 ntBASIC1.68□□□□□ -2.14
VPS13CQ709C8 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS13CQ709C8 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
VPS13CQ709C8 AC107871.2-201ENST00000612894 502 ntBASIC1.68□□□□□ -2.14
VPS13CQ709C8 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
VPS13CQ709C8 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
VPS13CQ709C8 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS13CQ709C8 RNU4-62P-201ENST00000410125 130 ntBASIC1.67□□□□□ -2.14
VPS13CQ709C8 AL445685.2-201ENST00000422551 342 ntBASIC1.67□□□□□ -2.14
VPS13CQ709C8 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.67□□□□□ -2.14
VPS13CQ709C8 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS13CQ709C8 GAPDHP27-201ENST00000447427 1020 ntBASIC1.67□□□□□ -2.14
VPS13CQ709C8 RPL36AP33-201ENST00000450395 310 ntBASIC1.67□□□□□ -2.14
VPS13CQ709C8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
VPS13CQ709C8 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS13CQ709C8 IGLV3-17-201ENST00000519099 244 ntBASIC1.67□□□□□ -2.14
VPS13CQ709C8 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.67□□□□□ -2.14
VPS13CQ709C8 AC110588.1-201ENST00000559699 137 ntBASIC1.67□□□□□ -2.14
VPS13CQ709C8 MIR4285-201ENST00000581001 85 ntBASIC1.67□□□□□ -2.14
VPS13CQ709C8 AC007620.3-201ENST00000608131 497 ntBASIC1.67□□□□□ -2.14
VPS13CQ709C8 PVT1_3.1-201ENST00000620853 95 ntBASIC1.67□□□□□ -2.14
VPS13CQ709C8 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
VPS13CQ709C8 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC1.67□□□□□ -2.14
VPS13CQ709C8 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
VPS13CQ709C8 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms