Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 TPT1P14-201ENST00000448018 505 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 AC079448.1-201ENST00000449377 373 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 RPL23AP81-201ENST00000455252 467 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 AMD1P1-201ENST00000457220 922 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.91□□□□□ -1.62
KRT40Q6A162 RN7SL691P-201ENST00000494487 301 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 AC106872.3-201ENST00000495104 446 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 AC009646.1-201ENST00000510455 318 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 AC026412.2-201ENST00000512270 1075 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.91□□□□□ -1.62
KRT40Q6A162 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.91□□□□□ -1.62
KRT40Q6A162 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.91□□□□□ -1.62
KRT40Q6A162 RNA5SP73-201ENST00000516744 108 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 AC104986.1-201ENST00000517978 436 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 AP001893.2-201ENST00000526949 202 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRT40Q6A162 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.91□□□□□ -1.62
KRT40Q6A162 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.91□□□□□ -1.62
KRT40Q6A162 CENPUP2-201ENST00000555897 1186 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.91□□□□□ -1.62
KRT40Q6A162 MIR4637-201ENST00000582405 84 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.91□□□□□ -1.62
KRT40Q6A162 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.91□□□□□ -1.62
KRT40Q6A162 HMGN1P30-201ENST00000589286 268 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 VN1R84P-201ENST00000593697 235 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 AC008945.2-201ENST00000606056 604 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 MIR432-201ENST00000606207 94 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 AC009994.1-201ENST00000606889 253 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 AC002553.4-201ENST00000616896 331 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
KRT40Q6A162 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 AC099654.10-201ENST00000640395 161 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRT40Q6A162 AC015813.6-201ENST00000624409 5808 ntBASIC4.91□□□□□ -1.62
KRT40Q6A162 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
KRT40Q6A162 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
KRT40Q6A162 AP002907.1-201ENST00000606361 1430 ntBASIC4.9□□□□□ -1.62
KRT40Q6A162 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
KRT40Q6A162 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
KRT40Q6A162 RNU1-132P-201ENST00000364300 164 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 RNU6-952P-201ENST00000391164 108 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.9□□□□□ -1.63
KRT40Q6A162 MIR1305-201ENST00000408300 86 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 SNORA11.2-201ENST00000408318 127 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
KRT40Q6A162 EIF4EP1-201ENST00000422311 642 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
KRT40Q6A162 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.9□□□□□ -1.63
KRT40Q6A162 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.9□□□□□ -1.63
KRT40Q6A162 RPL37P1-201ENST00000432310 284 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 MTCYBP45-201ENST00000435243 565 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.9□□□□□ -1.63
KRT40Q6A162 MTND5P14-201ENST00000441481 1267 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.9□□□□□ -1.63
KRT40Q6A162 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.9□□□□□ -1.63
KRT40Q6A162 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
KRT40Q6A162 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
KRT40Q6A162 AC022795.1-201ENST00000473808 480 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 AC022447.3-201ENST00000506865 495 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.9□□□□□ -1.63
KRT40Q6A162 PARP4P3-201ENST00000510265 317 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.9□□□□□ -1.63
KRT40Q6A162 RNU2-46P-201ENST00000517038 113 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 AP003467.2-201ENST00000520175 319 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.9□□□□□ -1.63
KRT40Q6A162 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.9□□□□□ -1.63
KRT40Q6A162 OR4A12P-201ENST00000530847 918 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.9□□□□□ -1.63
KRT40Q6A162 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.9□□□□□ -1.63
KRT40Q6A162 AC068714.1-201ENST00000559623 800 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.9□□□□□ -1.63
KRT40Q6A162 AL133457.1-201ENST00000564251 987 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 AC064801.1-201ENST00000612025 407 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 MIR6075-201ENST00000620782 95 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 CR392039.4-201ENST00000624968 501 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 AL596275.2-204ENST00000641628 552 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 AL596275.2-206ENST00000641957 626 ntBASIC4.9□□□□□ -1.63
KRT40Q6A162 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
KRT40Q6A162 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
KRT40Q6A162 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
KRT40Q6A162 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
KRT40Q6A162 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRT40Q6A162 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRT40Q6A162 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.89□□□□□ -1.63
KRT40Q6A162 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
KRT40Q6A162 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.89□□□□□ -1.63
KRT40Q6A162 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.89□□□□□ -1.63
KRT40Q6A162 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.89□□□□□ -1.63
KRT40Q6A162 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRT40Q6A162 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRT40Q6A162 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRT40Q6A162 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.89□□□□□ -1.63
KRT40Q6A162 RNA5SP52-201ENST00000362448 134 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 Y_RNA.38-201ENST00000362617 102 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 RNU1-14P-201ENST00000362759 152 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 RNU6-343P-201ENST00000364709 104 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 RNU4-55P-201ENST00000410731 137 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 RNU2-41P-201ENST00000410991 178 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms