Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 ZNF72P-201ENST00000425869 1908 ntBASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.33□□□□□ -1.4
PRPF38BQ5VTL8 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 PABPC1P8-201ENST00000452851 2086 ntBASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 AL591848.4-201ENST00000567832 3472 ntBASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 Y_RNA.222-201ENST00000364264 102 ntBASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 SNORA57.1-201ENST00000391227 145 ntBASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 MTCO2P33-201ENST00000402100 465 ntBASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 RPS3AP12-201ENST00000443616 753 ntBASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 AL031274.1-201ENST00000450334 232 ntBASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 BX276092.4-201ENST00000452056 248 ntBASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 RN7SL41P-201ENST00000476144 297 ntBASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 AC011005.2-201ENST00000487324 359 ntBASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 AC009120.1-201ENST00000493458 473 ntBASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 AC023818.1-201ENST00000498379 384 ntBASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 HSPE1P20-201ENST00000538133 289 ntBASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 AL137100.2-201ENST00000555786 315 ntBASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 AC104763.2-201ENST00000604179 382 ntBASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 AL162431.4-201ENST00000604674 411 ntBASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 AC120057.5-201ENST00000623840 154 ntBASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 AC027287.1-201ENST00000553115 1453 ntBASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 AP000866.6-201ENST00000638898 3579 ntBASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.32□□□□□ -1.4
PRPF38BQ5VTL8 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 AC007529.1-201ENST00000418574 2178 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 AC024587.1-201ENST00000505925 2157 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 OR56A5-201ENST00000340110 738 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 Y_RNA.60-201ENST00000362831 98 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 Y_RNA.117-201ENST00000363294 101 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 RNA5SP335-201ENST00000363817 110 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 Y_RNA.477-201ENST00000384352 108 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 RNU6-45P-201ENST00000384471 107 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 RNU2-38P-201ENST00000410856 79 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 AC099677.1-201ENST00000420575 175 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 AL391219.1-201ENST00000422570 483 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 RPL12P34-201ENST00000424532 479 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 AC073910.1-201ENST00000445047 438 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 MTCO3P8-201ENST00000453691 755 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 PCMTD1P1-201ENST00000455560 355 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 RPL17P19-201ENST00000489069 552 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 OR5D17P-201ENST00000531492 978 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 AC002044.1-201ENST00000606707 158 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 AL132640.3-201ENST00000630473 177 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 MIR4272-201ENST00000635924 64 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 SAGE4P-201ENST00000442271 3381 ntBASIC6.31□□□□□ -1.4
PRPF38BQ5VTL8 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms