Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 ZNF962P-201ENST00000443465 3140 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.78□□□□□ -1.64
LONRF3Q496Y0 RNU6-501P-201ENST00000364072 100 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 RNA5SP366-201ENST00000365454 123 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 RHOT1P2-201ENST00000366423 333 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.78□□□□□ -1.64
LONRF3Q496Y0 RNU6-723P-201ENST00000383973 107 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 RNU6-1119P-201ENST00000384349 108 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 RNU2-16P-201ENST00000410712 136 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 AF274854.1-201ENST00000413236 615 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.78□□□□□ -1.64
LONRF3Q496Y0 RAD23BP2-201ENST00000416003 1207 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 AL132765.1-201ENST00000434165 553 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 OR4C10P-201ENST00000434991 931 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.78□□□□□ -1.64
LONRF3Q496Y0 BMI1P1-201ENST00000445879 941 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 RPL23AP81-201ENST00000455252 467 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LONRF3Q496Y0 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.78□□□□□ -1.64
LONRF3Q496Y0 RN7SL585P-201ENST00000470538 280 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 AC023424.2-201ENST00000493479 777 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 AC025554.1-201ENST00000505641 188 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.78□□□□□ -1.64
LONRF3Q496Y0 RNA5SP154-201ENST00000516193 111 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 SNORA31.20-201ENST00000517111 133 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LONRF3Q496Y0 MED28P5-201ENST00000528254 438 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.78□□□□□ -1.64
LONRF3Q496Y0 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.78□□□□□ -1.64
LONRF3Q496Y0 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.78□□□□□ -1.64
LONRF3Q496Y0 MIR3160-1-201ENST00000577972 85 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 AC079089.3-201ENST00000603094 673 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 AL021997.1-201ENST00000605757 193 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LONRF3Q496Y0 AL161637.1-201ENST00000622380 412 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 AL359740.1-201ENST00000624340 592 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 MIR3653-201ENST00000625572 110 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.78□□□□□ -1.64
LONRF3Q496Y0 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.78□□□□□ -1.64
LONRF3Q496Y0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LONRF3Q496Y0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
LONRF3Q496Y0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.78□□□□□ -1.64
LONRF3Q496Y0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.78□□□□□ -1.64
LONRF3Q496Y0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.78□□□□□ -1.64
LONRF3Q496Y0 AC068254.2-201ENST00000623938 3577 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 AC244517.1-201ENST00000606030 2086 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 MIR383-201ENST00000362257 73 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 RNU6-712P-201ENST00000410558 100 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 AL365184.2-201ENST00000431139 435 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 RPL23AP89-201ENST00000439324 255 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 CDC27P1-201ENST00000445384 715 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 Z95327.1-201ENST00000446082 482 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 EEF1E1P1-201ENST00000446998 430 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 RPS24P6-201ENST00000452670 400 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 RNA5SP269-201ENST00000459032 137 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 RPL23AP62-201ENST00000463396 453 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 RPL23AP2-201ENST00000471227 466 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 OR5M7P-201ENST00000526140 972 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 MIR1254-2-201ENST00000579553 63 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 MIR4644-201ENST00000579929 84 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 AP001004.1-201ENST00000582468 324 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 SNORD84-203ENST00000584275 78 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 AC087683.1-201ENST00000591187 441 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 AL591034.3-201ENST00000605511 685 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 AL109618.2-201ENST00000605527 211 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 AC012603.1-201ENST00000606424 528 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 AC015540.1-201ENST00000615828 501 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 LINC00561-201ENST00000565815 2738 ntBASIC4.77□□□□□ -1.65
LONRF3Q496Y0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
LONRF3Q496Y0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
LONRF3Q496Y0 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
LONRF3Q496Y0 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.76□□□□□ -1.65
LONRF3Q496Y0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LONRF3Q496Y0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.76□□□□□ -1.65
LONRF3Q496Y0 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms