Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AL138885.1-201ENST00000405921 675 ntBASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 RNU4-46P-201ENST00000410818 138 ntBASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 AC010154.1-201ENST00000425857 269 ntBASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 AL590399.2-201ENST00000427536 309 ntBASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 RPS7P3-201ENST00000443360 580 ntBASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 AL133244.1-201ENST00000456007 258 ntBASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 UBA52P3-201ENST00000491303 382 ntBASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 RPS27P26-201ENST00000494583 239 ntBASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 RNU6-1069P-201ENST00000516612 133 ntBASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 RNU6-323P-201ENST00000521915 107 ntBASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 AL359219.2-201ENST00000555184 348 ntBASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 AP000843.1-201ENST00000624880 701 ntBASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 AC130304.1-201ENST00000622942 2385 ntBASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 TCP11X1-202ENST00000622971 1372 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 snoU2_19.2-201ENST00000363024 80 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 RNU6-1303P-201ENST00000364841 107 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 RNU6-444P-201ENST00000383988 108 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 AL445189.1-201ENST00000405722 338 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 RN7SKP151-201ENST00000410230 316 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 RNU4-78P-201ENST00000410940 126 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 NMD3P2-201ENST00000421815 761 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 RHOT1P3-201ENST00000436571 331 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 CEACAMP7-201ENST00000444105 496 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 AL035551.1-201ENST00000446931 348 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 RPL23AP15-201ENST00000450202 459 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 AC026801.1-201ENST00000497178 464 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 FTH1P21-201ENST00000512179 511 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 IGLV3-30-201ENST00000524362 298 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 AC026371.1-201ENST00000551867 419 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 AC090115.3-201ENST00000553218 849 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 AC106782.4-201ENST00000568264 210 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 AC119403.2-201ENST00000590960 598 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 AC245517.5-201ENST00000611529 162 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 RPSAP73-201ENST00000614820 330 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 AC068870.2-201ENST00000620635 389 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 AC000095.2-202ENST00000637415 154 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 AP000550.3-201ENST00000637734 379 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 MFSD8-219ENST00000641228 2559 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 SAMMSON-226ENST00000642089 1582 ntBASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTC1Q2NKJ3 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
CTC1Q2NKJ3 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.41
CTC1Q2NKJ3 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.21□□□□□ -1.41
CTC1Q2NKJ3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
CTC1Q2NKJ3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CTC1Q2NKJ3 AP001541.1-201ENST00000623322 1904 ntBASIC6.21□□□□□ -1.41
CTC1Q2NKJ3 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.21□□□□□ -1.42
CTC1Q2NKJ3 Y_RNA.16-201ENST00000362421 102 ntBASIC6.21□□□□□ -1.42
CTC1Q2NKJ3 RNA5SP183-201ENST00000362452 119 ntBASIC6.21□□□□□ -1.42
CTC1Q2NKJ3 RNA5SP507-201ENST00000363603 121 ntBASIC6.21□□□□□ -1.42
CTC1Q2NKJ3 RN7SKP186-201ENST00000365371 303 ntBASIC6.21□□□□□ -1.42
CTC1Q2NKJ3 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.42
CTC1Q2NKJ3 RNU6-1127P-201ENST00000384580 107 ntBASIC6.21□□□□□ -1.42
CTC1Q2NKJ3 MIR223-201ENST00000385204 110 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms