Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SIX1Q15475 Z77249.1-201ENST00000444622 1175 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX1Q15475 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX1Q15475 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX1Q15475 ANKRD26P4-201ENST00000455755 950 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 AL136097.1-201ENST00000456945 913 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 snoU13.22-201ENST00000459428 104 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 RPL7P49-201ENST00000471402 708 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 RPL7P38-201ENST00000488396 739 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 KLRA1P-201ENST00000503499 986 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 AC104090.1-201ENST00000506341 1171 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 SNORA3.4-201ENST00000515969 96 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 IGKV2D-19-201ENST00000523346 262 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 MTND2P26-201ENST00000528255 1029 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 OR5B10P-201ENST00000532869 642 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.36□□□□□ -1.87
SIX1Q15475 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.36□□□□□ -1.87
SIX1Q15475 ZNF321P-202ENST00000550843 495 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 DUXAP1-201ENST00000556632 463 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.36□□□□□ -1.87
SIX1Q15475 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX1Q15475 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.36□□□□□ -1.87
SIX1Q15475 MIR4504-201ENST00000577413 92 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 OR4K7P-201ENST00000580232 945 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.36□□□□□ -1.87
SIX1Q15475 SNORD39.3-201ENST00000584451 71 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.36□□□□□ -1.87
SIX1Q15475 AC092954.1-201ENST00000609121 445 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 AC131235.4-201ENST00000609288 620 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 AC012314.7-201ENST00000619693 93 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 AP003485.2-201ENST00000623636 610 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 AC091903.1-201ENST00000624322 454 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 AC017037.3-201ENST00000625016 472 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.36□□□□□ -1.87
SIX1Q15475 AC244258.1-201ENST00000637553 1071 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 AL392088.2-201ENST00000637607 285 ntBASIC3.36□□□□□ -1.87
SIX1Q15475 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SIX1Q15475 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.36□□□□□ -1.87
SIX1Q15475 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
SIX1Q15475 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.36□□□□□ -1.87
SIX1Q15475 AC093831.2-201ENST00000624393 3427 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SIX1Q15475 AL136964.1-201ENST00000622038 2990 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SIX1Q15475 SNORA63.1-201ENST00000362493 131 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SIX1Q15475 MIR506-201ENST00000384998 124 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 RPL21P3-201ENST00000395517 478 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 TAF9BP1-201ENST00000396646 746 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 AC068533.2-201ENST00000411872 306 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.35□□□□□ -1.87
SIX1Q15475 RPS29P4-201ENST00000414733 161 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.35□□□□□ -1.87
SIX1Q15475 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.35□□□□□ -1.87
SIX1Q15475 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.35□□□□□ -1.87
SIX1Q15475 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SIX1Q15475 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.35□□□□□ -1.87
SIX1Q15475 OR2AS1P-201ENST00000427827 319 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.35□□□□□ -1.87
SIX1Q15475 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.35□□□□□ -1.87
SIX1Q15475 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.35□□□□□ -1.87
SIX1Q15475 RPS12P18-201ENST00000442381 270 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.35□□□□□ -1.87
SIX1Q15475 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.35□□□□□ -1.87
SIX1Q15475 AC146507.2-201ENST00000460608 476 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 ST13P14-201ENST00000474095 734 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 KCTD9P5-201ENST00000504141 1170 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 AC021678.1-201ENST00000505195 936 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 SNX5P1-201ENST00000505757 1041 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.35□□□□□ -1.87
SIX1Q15475 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.35□□□□□ -1.87
SIX1Q15475 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SIX1Q15475 AC010587.2-201ENST00000511727 448 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.35□□□□□ -1.87
SIX1Q15475 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.35□□□□□ -1.87
SIX1Q15475 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.35□□□□□ -1.87
SIX1Q15475 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.35□□□□□ -1.87
SIX1Q15475 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
SIX1Q15475 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.35□□□□□ -1.87
SIX1Q15475 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.35□□□□□ -1.87
SIX1Q15475 AC007458.1-201ENST00000542812 373 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 SULT1C2P1-202ENST00000562418 459 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.35□□□□□ -1.87
SIX1Q15475 AC145350.1-201ENST00000567426 208 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 MIR2682-201ENST00000580305 110 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.35□□□□□ -1.87
SIX1Q15475 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.35□□□□□ -1.87
SIX1Q15475 AC067852.4-201ENST00000590314 478 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.35□□□□□ -1.87
SIX1Q15475 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.35□□□□□ -1.87
SIX1Q15475 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.35□□□□□ -1.87
SIX1Q15475 DPRXP5-201ENST00000604662 539 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 AC116618.1-201ENST00000634617 774 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.35□□□□□ -1.87
SIX1Q15475 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.35□□□□□ -1.87
SIX1Q15475 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SIX1Q15475 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SIX1Q15475 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SIX1Q15475 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms