Protein–RNA interactions for Protein: Q14683

SMC1A, Structural maintenance of chromosomes protein 1A, humanhuman

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1AQ14683 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.77□□□□□ -1.81
SMC1AQ14683 EEF1B2P4-201ENST00000551398 348 ntBASIC3.77□□□□□ -1.81
SMC1AQ14683 OR4T1P-201ENST00000554933 911 ntBASIC3.77□□□□□ -1.81
SMC1AQ14683 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SMC1AQ14683 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.77□□□□□ -1.81
SMC1AQ14683 YPEL5P2-201ENST00000605553 359 ntBASIC3.77□□□□□ -1.81
SMC1AQ14683 VN1R74P-201ENST00000613259 503 ntBASIC3.77□□□□□ -1.81
SMC1AQ14683 AC002076.2-201ENST00000617362 122 ntBASIC3.77□□□□□ -1.81
SMC1AQ14683 U4.6-201ENST00000621618 127 ntBASIC3.77□□□□□ -1.81
SMC1AQ14683 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.77□□□□□ -1.81
SMC1AQ14683 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SMC1AQ14683 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.77□□□□□ -1.81
SMC1AQ14683 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SMC1AQ14683 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.76□□□□□ -1.81
SMC1AQ14683 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SMC1AQ14683 RNA5SP383-201ENST00000362934 120 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 RNU6-207P-201ENST00000384137 107 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SMC1AQ14683 U3.29-201ENST00000391296 212 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 AL035405.1-201ENST00000400795 710 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 RNU6-1077P-201ENST00000410506 102 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 RN7SKP53-201ENST00000411337 315 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 MRPL50P2-201ENST00000416821 482 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.76□□□□□ -1.81
SMC1AQ14683 AC233728.2-201ENST00000425348 757 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 RPL21P40-201ENST00000428586 483 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.76□□□□□ -1.81
SMC1AQ14683 AC012497.1-201ENST00000429392 575 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.76□□□□□ -1.81
SMC1AQ14683 RPL36AP33-201ENST00000450395 310 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 AL445669.2-201ENST00000454425 421 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 BTF3P5-201ENST00000457252 467 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 RPS17P11-201ENST00000474297 293 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.76□□□□□ -1.81
SMC1AQ14683 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.76□□□□□ -1.81
SMC1AQ14683 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.76□□□□□ -1.81
SMC1AQ14683 SNORD59.2-201ENST00000516873 68 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 ERHP1-201ENST00000523006 310 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.76□□□□□ -1.81
SMC1AQ14683 AP000926.4-201ENST00000527351 454 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.76□□□□□ -1.81
SMC1AQ14683 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.76□□□□□ -1.81
SMC1AQ14683 AC018630.1-201ENST00000541376 925 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 AC090666.1-201ENST00000578241 445 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.76□□□□□ -1.81
SMC1AQ14683 AC012493.2-201ENST00000595083 291 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.76□□□□□ -1.81
SMC1AQ14683 AC008759.3-201ENST00000613300 508 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 AC006111.3-201ENST00000622137 383 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 AC093875.1-201ENST00000623688 504 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 AL512506.2-201ENST00000624472 458 ntBASIC3.76□□□□□ -1.81
SMC1AQ14683 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
SMC1AQ14683 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMC1AQ14683 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SMC1AQ14683 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMC1AQ14683 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SMC1AQ14683 RNU6-251P-201ENST00000363235 104 ntBASIC3.75□□□□□ -1.81
SMC1AQ14683 SNORD56.3-201ENST00000363507 71 ntBASIC3.75□□□□□ -1.81
SMC1AQ14683 SNORA51.6-201ENST00000384151 125 ntBASIC3.75□□□□□ -1.81
SMC1AQ14683 TAF9BP1-201ENST00000396646 746 ntBASIC3.75□□□□□ -1.81
SMC1AQ14683 AL355615.1-201ENST00000406187 641 ntBASIC3.75□□□□□ -1.81
SMC1AQ14683 RPL21P32-201ENST00000419877 477 ntBASIC3.75□□□□□ -1.81
SMC1AQ14683 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.75□□□□□ -1.81
SMC1AQ14683 MTCYBP34-201ENST00000439552 670 ntBASIC3.75□□□□□ -1.81
SMC1AQ14683 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.75□□□□□ -1.81
SMC1AQ14683 AC140076.1-201ENST00000449897 361 ntBASIC3.75□□□□□ -1.81
SMC1AQ14683 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SMC1AQ14683 AC023598.1-201ENST00000472521 361 ntBASIC3.75□□□□□ -1.81
SMC1AQ14683 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.75□□□□□ -1.81
SMC1AQ14683 RNU6-27P-201ENST00000516146 107 ntBASIC3.75□□□□□ -1.81
SMC1AQ14683 RNA5SP380-201ENST00000517190 98 ntBASIC3.75□□□□□ -1.81
SMC1AQ14683 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.75□□□□□ -1.81
SMC1AQ14683 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.75□□□□□ -1.81
SMC1AQ14683 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.75□□□□□ -1.81
SMC1AQ14683 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.75□□□□□ -1.81
SMC1AQ14683 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.75□□□□□ -1.81
SMC1AQ14683 SULT1C2P1-202ENST00000562418 459 ntBASIC3.75□□□□□ -1.81
SMC1AQ14683 FAM60BP-201ENST00000578364 658 ntBASIC3.75□□□□□ -1.81
SMC1AQ14683 AL133393.1-201ENST00000603277 287 ntBASIC3.75□□□□□ -1.81
SMC1AQ14683 BNIP3P11-201ENST00000603878 563 ntBASIC3.75□□□□□ -1.81
SMC1AQ14683 AC107294.3-201ENST00000609211 526 ntBASIC3.75□□□□□ -1.81
SMC1AQ14683 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.75□□□□□ -1.81
SMC1AQ14683 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.75□□□□□ -1.81
SMC1AQ14683 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.75□□□□□ -1.81
SMC1AQ14683 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.75□□□□□ -1.81
SMC1AQ14683 AC090897.3-201ENST00000636973 1157 ntBASIC3.75□□□□□ -1.81
SMC1AQ14683 AC007496.3-201ENST00000624987 3443 ntBASIC3.75□□□□□ -1.81
SMC1AQ14683 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMC1AQ14683 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMC1AQ14683 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.75□□□□□ -1.81
SMC1AQ14683 AC093010.3-201ENST00000570269 15214 ntBASIC3.75□□□□□ -1.81
SMC1AQ14683 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SMC1AQ14683 GNG5P1-201ENST00000255500 204 ntBASIC3.74□□□□□ -1.81
SMC1AQ14683 CYCSP45-201ENST00000402289 315 ntBASIC3.74□□□□□ -1.81
SMC1AQ14683 AL136133.1-201ENST00000413694 376 ntBASIC3.74□□□□□ -1.81
SMC1AQ14683 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.74□□□□□ -1.81
SMC1AQ14683 HSPE1P1-201ENST00000421494 318 ntBASIC3.74□□□□□ -1.81
SMC1AQ14683 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.74□□□□□ -1.81
SMC1AQ14683 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms