Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 RBM43P1-201ENST00000476891 1081 ntBASIC2.08□□□□□ -2.08
HIST1H1AQ02539 AC015908.1-201ENST00000478739 476 ntBASIC2.08□□□□□ -2.08
HIST1H1AQ02539 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 AC135721.1-201ENST00000497954 479 ntBASIC2.08□□□□□ -2.08
HIST1H1AQ02539 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 RN7SKP57-201ENST00000517248 293 ntBASIC2.08□□□□□ -2.08
HIST1H1AQ02539 AC008562.1-201ENST00000521763 330 ntBASIC2.08□□□□□ -2.08
HIST1H1AQ02539 OR10V3P-201ENST00000525712 725 ntBASIC2.08□□□□□ -2.08
HIST1H1AQ02539 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 AC008739.2-201ENST00000597006 317 ntBASIC2.08□□□□□ -2.08
HIST1H1AQ02539 AC008687.2-201ENST00000597865 520 ntBASIC2.08□□□□□ -2.08
HIST1H1AQ02539 AC125494.3-201ENST00000602759 455 ntBASIC2.08□□□□□ -2.08
HIST1H1AQ02539 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 AC024153.1-201ENST00000603103 365 ntBASIC2.08□□□□□ -2.08
HIST1H1AQ02539 AC005046.1-201ENST00000608515 625 ntBASIC2.08□□□□□ -2.08
HIST1H1AQ02539 AC034102.8-201ENST00000615146 484 ntBASIC2.08□□□□□ -2.08
HIST1H1AQ02539 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 PABPC1P9-201ENST00000426076 1612 ntBASIC2.08□□□□□ -2.08
HIST1H1AQ02539 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.08□□□□□ -2.08
HIST1H1AQ02539 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HIST1H1AQ02539 SGO1P2-201ENST00000429458 1589 ntBASIC2.07□□□□□ -2.08
HIST1H1AQ02539 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
HIST1H1AQ02539 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
HIST1H1AQ02539 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HIST1H1AQ02539 RNU1-140P-201ENST00000365040 165 ntBASIC2.07□□□□□ -2.08
HIST1H1AQ02539 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.07□□□□□ -2.08
HIST1H1AQ02539 RNU6-452P-201ENST00000384406 107 ntBASIC2.07□□□□□ -2.08
HIST1H1AQ02539 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.07□□□□□ -2.08
HIST1H1AQ02539 EEF1A1P41-201ENST00000414667 207 ntBASIC2.07□□□□□ -2.08
HIST1H1AQ02539 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.07□□□□□ -2.08
HIST1H1AQ02539 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.07□□□□□ -2.08
HIST1H1AQ02539 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.07□□□□□ -2.08
HIST1H1AQ02539 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.07□□□□□ -2.08
HIST1H1AQ02539 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.07□□□□□ -2.08
HIST1H1AQ02539 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.07□□□□□ -2.08
HIST1H1AQ02539 AC010374.2-201ENST00000512933 535 ntBASIC2.07□□□□□ -2.08
HIST1H1AQ02539 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.07□□□□□ -2.08
HIST1H1AQ02539 AL121603.1-201ENST00000553815 142 ntBASIC2.07□□□□□ -2.08
HIST1H1AQ02539 OR4G1P-201ENST00000588632 938 ntBASIC2.07□□□□□ -2.08
HIST1H1AQ02539 TPMTP1-201ENST00000592307 737 ntBASIC2.07□□□□□ -2.08
HIST1H1AQ02539 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.07□□□□□ -2.08
HIST1H1AQ02539 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.07□□□□□ -2.08
HIST1H1AQ02539 MIR8057-201ENST00000620957 69 ntBASIC2.07□□□□□ -2.08
HIST1H1AQ02539 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.07□□□□□ -2.08
HIST1H1AQ02539 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.07□□□□□ -2.08
HIST1H1AQ02539 MIR3651-201ENST00000630427 90 ntBASIC2.07□□□□□ -2.08
HIST1H1AQ02539 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.07□□□□□ -2.08
HIST1H1AQ02539 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HIST1H1AQ02539 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.07□□□□□ -2.08
HIST1H1AQ02539 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HIST1H1AQ02539 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
HIST1H1AQ02539 SNORD46.1-201ENST00000364139 104 ntBASIC2.06□□□□□ -2.08
HIST1H1AQ02539 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
HIST1H1AQ02539 RNU6-31P-201ENST00000384388 108 ntBASIC2.06□□□□□ -2.08
HIST1H1AQ02539 AC007064.1-201ENST00000412238 351 ntBASIC2.06□□□□□ -2.08
HIST1H1AQ02539 RPS20P25-201ENST00000412447 352 ntBASIC2.06□□□□□ -2.08
HIST1H1AQ02539 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HIST1H1AQ02539 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.06□□□□□ -2.08
HIST1H1AQ02539 MTCO1P45-201ENST00000431457 267 ntBASIC2.06□□□□□ -2.08
HIST1H1AQ02539 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.06□□□□□ -2.08
HIST1H1AQ02539 RPL23AP74-201ENST00000437246 471 ntBASIC2.06□□□□□ -2.08
HIST1H1AQ02539 AC093156.1-201ENST00000440382 670 ntBASIC2.06□□□□□ -2.08
HIST1H1AQ02539 AC011753.1-201ENST00000451001 220 ntBASIC2.06□□□□□ -2.08
HIST1H1AQ02539 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.06□□□□□ -2.08
HIST1H1AQ02539 AC126121.1-201ENST00000482313 553 ntBASIC2.06□□□□□ -2.08
HIST1H1AQ02539 AC023424.2-201ENST00000493479 777 ntBASIC2.06□□□□□ -2.08
HIST1H1AQ02539 CAB39P1-201ENST00000502277 460 ntBASIC2.06□□□□□ -2.08
HIST1H1AQ02539 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.06□□□□□ -2.08
HIST1H1AQ02539 AC133963.2-201ENST00000513686 578 ntBASIC2.06□□□□□ -2.08
HIST1H1AQ02539 SNORA74D-201ENST00000516404 141 ntBASIC2.06□□□□□ -2.08
HIST1H1AQ02539 COX6B1P6-201ENST00000522347 255 ntBASIC2.06□□□□□ -2.08
HIST1H1AQ02539 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.06□□□□□ -2.08
HIST1H1AQ02539 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.06□□□□□ -2.08
HIST1H1AQ02539 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.06□□□□□ -2.08
HIST1H1AQ02539 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
HIST1H1AQ02539 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.06□□□□□ -2.08
HIST1H1AQ02539 AC007179.3-201ENST00000604976 235 ntBASIC2.06□□□□□ -2.08
HIST1H1AQ02539 AC135178.6-201ENST00000605314 398 ntBASIC2.06□□□□□ -2.08
HIST1H1AQ02539 AC096577.2-201ENST00000611455 153 ntBASIC2.06□□□□□ -2.08
HIST1H1AQ02539 NF1P10-201ENST00000613227 742 ntBASIC2.06□□□□□ -2.08
HIST1H1AQ02539 MIR6895-201ENST00000613497 78 ntBASIC2.06□□□□□ -2.08
HIST1H1AQ02539 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
HIST1H1AQ02539 AL360181.4-201ENST00000621752 134 ntBASIC2.06□□□□□ -2.08
HIST1H1AQ02539 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.06□□□□□ -2.08
HIST1H1AQ02539 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
HIST1H1AQ02539 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.06□□□□□ -2.08
HIST1H1AQ02539 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.06□□□□□ -2.08
HIST1H1AQ02539 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HIST1H1AQ02539 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms