Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PKNOX1P55347 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PKNOX1P55347 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PKNOX1P55347 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
PKNOX1P55347 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.05□□□□□ -1.92
PKNOX1P55347 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
PKNOX1P55347 RNU6-1249P-201ENST00000363237 111 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 SUGT1P1-201ENST00000379514 476 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 RNU6-821P-201ENST00000390995 107 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 AL079342.2-201ENST00000403367 482 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.05□□□□□ -1.92
PKNOX1P55347 AL024474.1-201ENST00000404655 591 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 LUZP4P1-201ENST00000415420 344 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 MTCO3P1-205ENST00000422088 832 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 PTP4A1P7-201ENST00000423476 514 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 HSFY1P1-201ENST00000423928 1178 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PKNOX1P55347 OR2B8P-201ENST00000432841 938 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.05□□□□□ -1.92
PKNOX1P55347 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.05□□□□□ -1.92
PKNOX1P55347 MTCYBP42-201ENST00000444653 1130 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 AC010301.1-201ENST00000473936 355 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PKNOX1P55347 AC093767.1-201ENST00000504523 156 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PKNOX1P55347 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.05□□□□□ -1.92
PKNOX1P55347 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.05□□□□□ -1.92
PKNOX1P55347 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PKNOX1P55347 RNU6-1028P-201ENST00000517164 93 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.05□□□□□ -1.92
PKNOX1P55347 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.05□□□□□ -1.92
PKNOX1P55347 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.05□□□□□ -1.92
PKNOX1P55347 AC011611.1-201ENST00000552179 197 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.05□□□□□ -1.92
PKNOX1P55347 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.05□□□□□ -1.92
PKNOX1P55347 AC087481.2-201ENST00000565492 330 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.05□□□□□ -1.92
PKNOX1P55347 CKS1BP3-201ENST00000600888 237 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 AL445435.1-201ENST00000604232 665 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 AC093673.2-201ENST00000609674 331 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 AC006329.2-201ENST00000611491 394 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 AL157770.1-201ENST00000623049 439 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 AC040168.1-201ENST00000623594 991 ntBASIC3.05□□□□□ -1.92
PKNOX1P55347 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PKNOX1P55347 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PKNOX1P55347 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
PKNOX1P55347 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
PKNOX1P55347 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PKNOX1P55347 RPL23AP57-201ENST00000332361 466 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
PKNOX1P55347 RNU6-492P-201ENST00000363035 104 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 MIR490-201ENST00000384865 128 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PKNOX1P55347 AC016769.3-201ENST00000396562 315 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 TAF9BP1-201ENST00000396646 746 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 RAD23BP2-201ENST00000416003 1207 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 MTCO3P12-201ENST00000416718 547 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.04□□□□□ -1.92
PKNOX1P55347 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.04□□□□□ -1.92
PKNOX1P55347 AC108734.1-201ENST00000439549 399 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 TRIM60P18-201ENST00000441518 828 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 MTCO1P48-201ENST00000448024 1096 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 AC093392.2-201ENST00000450682 337 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.04□□□□□ -1.92
PKNOX1P55347 RPL21P10-201ENST00000463521 490 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
PKNOX1P55347 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.04□□□□□ -1.92
PKNOX1P55347 BOLA3P3-201ENST00000505182 232 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 SUMO2P5-201ENST00000506790 245 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PKNOX1P55347 AC023632.4-201ENST00000517783 191 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PKNOX1P55347 MTND2P7-201ENST00000521337 640 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 AC090502.2-201ENST00000549267 280 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 LARP7P2-201ENST00000575306 125 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.04□□□□□ -1.92
PKNOX1P55347 AC006116.7-201ENST00000590141 756 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.04□□□□□ -1.92
PKNOX1P55347 BNIP3P31-201ENST00000604515 566 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 AC092954.1-201ENST00000609121 445 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 AC010975.3-201ENST00000618727 978 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.04□□□□□ -1.92
PKNOX1P55347 AC106858.1-201ENST00000637497 429 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 MFSD8-245ENST00000641743 948 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PKNOX1P55347 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PKNOX1P55347 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
PKNOX1P55347 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.04□□□□□ -1.92
PKNOX1P55347 NUP58P1-201ENST00000502546 1738 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 AL353743.1-202ENST00000431724 1695 ntBASIC3.04□□□□□ -1.92
PKNOX1P55347 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.03□□□□□ -1.92
PKNOX1P55347 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.03□□□□□ -1.92
PKNOX1P55347 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PKNOX1P55347 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.03□□□□□ -1.92
PKNOX1P55347 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
PKNOX1P55347 ANKRD36P1-201ENST00000344424 659 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms