Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC026412.2-201ENST00000512270 1075 ntBASIC2.72□□□□□ -1.97
NUP98P52948 SNORA70.14-201ENST00000516205 110 ntBASIC2.72□□□□□ -1.97
NUP98P52948 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
NUP98P52948 AC022884.3-201ENST00000579571 248 ntBASIC2.72□□□□□ -1.97
NUP98P52948 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.72□□□□□ -1.97
NUP98P52948 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.72□□□□□ -1.97
NUP98P52948 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.72□□□□□ -1.97
NUP98P52948 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.72□□□□□ -1.97
NUP98P52948 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.72□□□□□ -1.97
NUP98P52948 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NUP98P52948 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.72□□□□□ -1.97
NUP98P52948 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.72□□□□□ -1.97
NUP98P52948 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NUP98P52948 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NUP98P52948 MIR6073-201ENST00000352083 89 ntBASIC2.72□□□□□ -1.97
NUP98P52948 U3.15-201ENST00000365398 212 ntBASIC2.72□□□□□ -1.97
NUP98P52948 MTCYBP7-201ENST00000419540 1134 ntBASIC2.72□□□□□ -1.97
NUP98P52948 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.72□□□□□ -1.97
NUP98P52948 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.72□□□□□ -1.97
NUP98P52948 HIGD1AP10-201ENST00000527837 282 ntBASIC2.72□□□□□ -1.97
NUP98P52948 AC018754.1-201ENST00000607486 925 ntBASIC2.72□□□□□ -1.97
NUP98P52948 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NUP98P52948 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.72□□□□□ -1.97
NUP98P52948 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NUP98P52948 AC002543.1-201ENST00000299783 1954 ntBASIC2.72□□□□□ -1.97
NUP98P52948 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NUP98P52948 AC025125.1-201ENST00000624743 1922 ntBASIC2.71□□□□□ -1.98
NUP98P52948 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
NUP98P52948 DEFA7P-201ENST00000382676 285 ntBASIC2.71□□□□□ -1.98
NUP98P52948 SNORA48.3-201ENST00000391081 134 ntBASIC2.71□□□□□ -1.98
NUP98P52948 DHFRP5-201ENST00000406944 564 ntBASIC2.71□□□□□ -1.98
NUP98P52948 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.71□□□□□ -1.98
NUP98P52948 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.71□□□□□ -1.98
NUP98P52948 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.71□□□□□ -1.98
NUP98P52948 CFTRP1-201ENST00000456646 183 ntBASIC2.71□□□□□ -1.98
NUP98P52948 RNU6-991P-201ENST00000516168 107 ntBASIC2.71□□□□□ -1.98
NUP98P52948 RNA5SP309-201ENST00000516670 106 ntBASIC2.71□□□□□ -1.98
NUP98P52948 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.71□□□□□ -1.98
NUP98P52948 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.71□□□□□ -1.98
NUP98P52948 AC012213.4-201ENST00000606457 354 ntBASIC2.71□□□□□ -1.98
NUP98P52948 AC010378.1-201ENST00000619270 362 ntBASIC2.71□□□□□ -1.98
NUP98P52948 AC084035.1-201ENST00000634543 607 ntBASIC2.71□□□□□ -1.98
NUP98P52948 CU459211.1-201ENST00000635667 749 ntBASIC2.71□□□□□ -1.98
NUP98P52948 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.7□□□□□ -1.98
NUP98P52948 SNORA11.4-201ENST00000408823 129 ntBASIC2.7□□□□□ -1.98
NUP98P52948 RPL31P45-201ENST00000419532 356 ntBASIC2.7□□□□□ -1.98
NUP98P52948 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.7□□□□□ -1.98
NUP98P52948 AC093716.1-201ENST00000435923 377 ntBASIC2.7□□□□□ -1.98
NUP98P52948 TVP23BP2-201ENST00000455082 615 ntBASIC2.7□□□□□ -1.98
NUP98P52948 AP000873.1-201ENST00000463987 400 ntBASIC2.7□□□□□ -1.98
NUP98P52948 TRBV1-201ENST00000476502 284 ntBASIC2.7□□□□□ -1.98
NUP98P52948 AC108210.2-201ENST00000503681 201 ntBASIC2.7□□□□□ -1.98
NUP98P52948 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.7□□□□□ -1.98
NUP98P52948 AK6P1-201ENST00000540219 478 ntBASIC2.7□□□□□ -1.98
NUP98P52948 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
NUP98P52948 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NUP98P52948 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.7□□□□□ -1.98
NUP98P52948 SAR1AP2-201ENST00000392696 594 ntBASIC2.7□□□□□ -1.98
NUP98P52948 AC007390.1-201ENST00000415722 356 ntBASIC2.7□□□□□ -1.98
NUP98P52948 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.7□□□□□ -1.98
NUP98P52948 FAM92A1P2-202ENST00000504766 877 ntBASIC2.7□□□□□ -1.98
NUP98P52948 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.7□□□□□ -1.98
NUP98P52948 OR5BN1P-201ENST00000532955 829 ntBASIC2.7□□□□□ -1.98
NUP98P52948 AC012182.1-201ENST00000570133 895 ntBASIC2.7□□□□□ -1.98
NUP98P52948 KC877982.1-201ENST00000602313 470 ntBASIC2.7□□□□□ -1.98
NUP98P52948 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.7□□□□□ -1.98
NUP98P52948 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.7□□□□□ -1.98
NUP98P52948 AC245517.5-201ENST00000611529 162 ntBASIC2.7□□□□□ -1.98
NUP98P52948 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.7□□□□□ -1.98
NUP98P52948 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NUP98P52948 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NUP98P52948 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NUP98P52948 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.69□□□□□ -1.98
NUP98P52948 SAR1AP4-201ENST00000429225 591 ntBASIC2.69□□□□□ -1.98
NUP98P52948 MTCYBP29-201ENST00000436327 1006 ntBASIC2.69□□□□□ -1.98
NUP98P52948 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.69□□□□□ -1.98
NUP98P52948 TRBV26-201ENST00000456572 344 ntBASIC2.69□□□□□ -1.98
NUP98P52948 SNX5P1-201ENST00000505757 1041 ntBASIC2.69□□□□□ -1.98
NUP98P52948 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.69□□□□□ -1.98
NUP98P52948 AC006270.2-201ENST00000578523 652 ntBASIC2.69□□□□□ -1.98
NUP98P52948 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC2.69□□□□□ -1.98
NUP98P52948 AL450472.3-201ENST00000615578 367 ntBASIC2.69□□□□□ -1.98
NUP98P52948 AC103798.2-201ENST00000624292 632 ntBASIC2.69□□□□□ -1.98
NUP98P52948 SYT14P1-202ENST00000600441 1448 ntBASIC2.69□□□□□ -1.98
NUP98P52948 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NUP98P52948 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
NUP98P52948 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
NUP98P52948 RNU1-138P-201ENST00000384093 164 ntBASIC2.68□□□□□ -1.98
NUP98P52948 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.68□□□□□ -1.98
NUP98P52948 AL118520.1-201ENST00000450770 291 ntBASIC2.68□□□□□ -1.98
NUP98P52948 RNU7-27P-201ENST00000459281 62 ntBASIC2.68□□□□□ -1.98
NUP98P52948 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.68□□□□□ -1.98
NUP98P52948 AC092185.1-201ENST00000491371 97 ntBASIC2.68□□□□□ -1.98
NUP98P52948 RNU6-319P-201ENST00000516025 108 ntBASIC2.68□□□□□ -1.98
NUP98P52948 AC010198.2-201ENST00000550612 259 ntBASIC2.68□□□□□ -1.98
NUP98P52948 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.68□□□□□ -1.98
NUP98P52948 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.68□□□□□ -1.98
NUP98P52948 AL451074.6-201ENST00000608512 729 ntBASIC2.68□□□□□ -1.98
NUP98P52948 AL137847.3-201ENST00000611521 109 ntBASIC2.68□□□□□ -1.98
NUP98P52948 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms