Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
GTF2A1P52655 AC010680.1-201ENST00000590024 3590 ntBASIC2.46□□□□□ -2.02
GTF2A1P52655 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
GTF2A1P52655 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.46□□□□□ -2.02
GTF2A1P52655 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
GTF2A1P52655 RNU1-100P-201ENST00000365255 165 ntBASIC2.46□□□□□ -2.02
GTF2A1P52655 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
GTF2A1P52655 RNU6-1072P-201ENST00000384703 107 ntBASIC2.46□□□□□ -2.02
GTF2A1P52655 RNU6-443P-201ENST00000384780 107 ntBASIC2.46□□□□□ -2.02
GTF2A1P52655 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.46□□□□□ -2.02
GTF2A1P52655 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.46□□□□□ -2.02
GTF2A1P52655 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.46□□□□□ -2.02
GTF2A1P52655 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.46□□□□□ -2.02
GTF2A1P52655 AL591503.2-201ENST00000442314 1005 ntBASIC2.46□□□□□ -2.02
GTF2A1P52655 RPL6P5-201ENST00000445678 828 ntBASIC2.46□□□□□ -2.02
GTF2A1P52655 RPL31P20-201ENST00000449593 360 ntBASIC2.46□□□□□ -2.02
GTF2A1P52655 snoU13.7-201ENST00000459220 104 ntBASIC2.46□□□□□ -2.02
GTF2A1P52655 SYPL1P1-201ENST00000473622 768 ntBASIC2.46□□□□□ -2.02
GTF2A1P52655 AL135752.1-201ENST00000479477 471 ntBASIC2.46□□□□□ -2.02
GTF2A1P52655 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.46□□□□□ -2.02
GTF2A1P52655 AC008413.1-201ENST00000511864 177 ntBASIC2.46□□□□□ -2.02
GTF2A1P52655 AP003467.2-201ENST00000520175 319 ntBASIC2.46□□□□□ -2.02
GTF2A1P52655 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.46□□□□□ -2.02
GTF2A1P52655 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.46□□□□□ -2.02
GTF2A1P52655 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.46□□□□□ -2.02
GTF2A1P52655 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.46□□□□□ -2.02
GTF2A1P52655 BNIP3P11-201ENST00000603878 563 ntBASIC2.46□□□□□ -2.02
GTF2A1P52655 AL138880.2-201ENST00000616214 239 ntBASIC2.46□□□□□ -2.02
GTF2A1P52655 MIR7975-201ENST00000619350 68 ntBASIC2.46□□□□□ -2.02
GTF2A1P52655 AC098657.3-201ENST00000620434 263 ntBASIC2.46□□□□□ -2.02
GTF2A1P52655 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.46□□□□□ -2.02
GTF2A1P52655 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.46□□□□□ -2.02
GTF2A1P52655 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.46□□□□□ -2.02
GTF2A1P52655 CENPCP1-201ENST00000533085 2578 ntBASIC2.46□□□□□ -2.02
GTF2A1P52655 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.46□□□□□ -2.02
GTF2A1P52655 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
GTF2A1P52655 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
GTF2A1P52655 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
GTF2A1P52655 AL359851.1-201ENST00000569460 4997 ntBASIC2.45□□□□□ -2.02
GTF2A1P52655 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
GTF2A1P52655 AL162578.1-201ENST00000406202 378 ntBASIC2.45□□□□□ -2.02
GTF2A1P52655 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.45□□□□□ -2.02
GTF2A1P52655 AC069157.1-201ENST00000421749 137 ntBASIC2.45□□□□□ -2.02
GTF2A1P52655 UBE2D3P2-201ENST00000424409 445 ntBASIC2.45□□□□□ -2.02
GTF2A1P52655 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.45□□□□□ -2.02
GTF2A1P52655 NIPA2P5-201ENST00000452282 464 ntBASIC2.45□□□□□ -2.02
GTF2A1P52655 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.45□□□□□ -2.02
GTF2A1P52655 RPL23AP49-201ENST00000492925 468 ntBASIC2.45□□□□□ -2.02
GTF2A1P52655 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
GTF2A1P52655 AC112673.1-201ENST00000513168 575 ntBASIC2.45□□□□□ -2.02
GTF2A1P52655 SCGB1D5P-201ENST00000515134 247 ntBASIC2.45□□□□□ -2.02
GTF2A1P52655 HMGB1P23-201ENST00000518743 568 ntBASIC2.45□□□□□ -2.02
GTF2A1P52655 AC100870.1-201ENST00000522035 505 ntBASIC2.45□□□□□ -2.02
GTF2A1P52655 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC2.45□□□□□ -2.02
GTF2A1P52655 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.45□□□□□ -2.02
GTF2A1P52655 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.45□□□□□ -2.02
GTF2A1P52655 AC009303.3-201ENST00000591103 736 ntBASIC2.45□□□□□ -2.02
GTF2A1P52655 ELOCP35-201ENST00000604289 336 ntBASIC2.45□□□□□ -2.02
GTF2A1P52655 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.45□□□□□ -2.02
GTF2A1P52655 MIR6076-201ENST00000617521 113 ntBASIC2.45□□□□□ -2.02
GTF2A1P52655 AC015967.1-201ENST00000619893 476 ntBASIC2.45□□□□□ -2.02
GTF2A1P52655 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.45□□□□□ -2.02
GTF2A1P52655 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.45□□□□□ -2.02
GTF2A1P52655 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
GTF2A1P52655 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.45□□□□□ -2.02
GTF2A1P52655 ZNF37BP-203ENST00000452306 1352 ntBASIC2.45□□□□□ -2.02
GTF2A1P52655 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.45□□□□□ -2.02
GTF2A1P52655 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
GTF2A1P52655 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
GTF2A1P52655 SNORA62.3-201ENST00000365110 153 ntBASIC2.44□□□□□ -2.02
GTF2A1P52655 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.44□□□□□ -2.02
GTF2A1P52655 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
GTF2A1P52655 MIR134-201ENST00000385258 73 ntBASIC2.44□□□□□ -2.02
GTF2A1P52655 U3.19-201ENST00000390893 196 ntBASIC2.44□□□□□ -2.02
GTF2A1P52655 RNU6-233P-201ENST00000410845 141 ntBASIC2.44□□□□□ -2.02
GTF2A1P52655 RNA5SP120-201ENST00000410900 112 ntBASIC2.44□□□□□ -2.02
GTF2A1P52655 AL512504.1-201ENST00000415494 778 ntBASIC2.44□□□□□ -2.02
GTF2A1P52655 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.44□□□□□ -2.02
GTF2A1P52655 Z77249.1-201ENST00000444622 1175 ntBASIC2.44□□□□□ -2.02
GTF2A1P52655 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.44□□□□□ -2.02
GTF2A1P52655 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.44□□□□□ -2.02
GTF2A1P52655 AC104435.1-201ENST00000483483 166 ntBASIC2.44□□□□□ -2.02
GTF2A1P52655 SAP18P1-201ENST00000512058 390 ntBASIC2.44□□□□□ -2.02
GTF2A1P52655 AC092593.2-201ENST00000513866 913 ntBASIC2.44□□□□□ -2.02
GTF2A1P52655 RNA5SP364-201ENST00000516938 78 ntBASIC2.44□□□□□ -2.02
GTF2A1P52655 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
GTF2A1P52655 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.44□□□□□ -2.02
GTF2A1P52655 AC034105.4-201ENST00000568304 277 ntBASIC2.44□□□□□ -2.02
GTF2A1P52655 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.44□□□□□ -2.02
GTF2A1P52655 MIR4658-201ENST00000584344 65 ntBASIC2.44□□□□□ -2.02
GTF2A1P52655 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.44□□□□□ -2.02
GTF2A1P52655 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.44□□□□□ -2.02
GTF2A1P52655 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.44□□□□□ -2.02
GTF2A1P52655 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.44□□□□□ -2.02
GTF2A1P52655 uc_338.20-201ENST00000621563 178 ntBASIC2.44□□□□□ -2.02
GTF2A1P52655 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.44□□□□□ -2.02
GTF2A1P52655 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.44□□□□□ -2.02
GTF2A1P52655 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
GTF2A1P52655 AC090740.1-201ENST00000623193 2262 ntBASIC2.44□□□□□ -2.02
GTF2A1P52655 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms