Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.1□□□□□ -1.59
MRE11P49959 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
MRE11P49959 Y_RNA.296-201ENST00000364930 108 ntBASIC5.1□□□□□ -1.59
MRE11P49959 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.1□□□□□ -1.59
MRE11P49959 RNU1-89P-201ENST00000384592 164 ntBASIC5.1□□□□□ -1.59
MRE11P49959 PTMAP2-201ENST00000397627 327 ntBASIC5.1□□□□□ -1.59
MRE11P49959 AC073264.1-201ENST00000411508 416 ntBASIC5.1□□□□□ -1.59
MRE11P49959 RPS3AP3-201ENST00000411933 242 ntBASIC5.1□□□□□ -1.59
MRE11P49959 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.1□□□□□ -1.59
MRE11P49959 C1DP2-201ENST00000418167 426 ntBASIC5.1□□□□□ -1.59
MRE11P49959 AL139413.1-201ENST00000421309 217 ntBASIC5.1□□□□□ -1.59
MRE11P49959 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
MRE11P49959 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.1□□□□□ -1.59
MRE11P49959 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.1□□□□□ -1.59
MRE11P49959 AC073614.1-201ENST00000438690 650 ntBASIC5.1□□□□□ -1.59
MRE11P49959 PGBD4P3-201ENST00000440731 581 ntBASIC5.1□□□□□ -1.59
MRE11P49959 AC004865.1-201ENST00000442276 1003 ntBASIC5.1□□□□□ -1.59
MRE11P49959 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.1□□□□□ -1.59
MRE11P49959 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.1□□□□□ -1.59
MRE11P49959 TPT1P14-201ENST00000448018 505 ntBASIC5.1□□□□□ -1.59
MRE11P49959 AC239809.1-201ENST00000450470 217 ntBASIC5.1□□□□□ -1.59
MRE11P49959 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.1□□□□□ -1.59
MRE11P49959 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.1□□□□□ -1.59
MRE11P49959 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
MRE11P49959 AC139769.1-204ENST00000472297 1931 ntBASIC5.1□□□□□ -1.59
MRE11P49959 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.1□□□□□ -1.59
MRE11P49959 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.1□□□□□ -1.59
MRE11P49959 AC108064.1-201ENST00000513791 460 ntBASIC5.1□□□□□ -1.59
MRE11P49959 RNU6-507P-201ENST00000516045 100 ntBASIC5.1□□□□□ -1.59
MRE11P49959 AC022878.1-201ENST00000530684 149 ntBASIC5.1□□□□□ -1.59
MRE11P49959 FGF7P1-201ENST00000582820 288 ntBASIC5.1□□□□□ -1.59
MRE11P49959 AC005730.3-201ENST00000583067 366 ntBASIC5.1□□□□□ -1.59
MRE11P49959 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
MRE11P49959 AL160290.3-201ENST00000604869 165 ntBASIC5.1□□□□□ -1.59
MRE11P49959 AP001521.1-201ENST00000609150 300 ntBASIC5.1□□□□□ -1.59
MRE11P49959 AC123768.4-201ENST00000616244 701 ntBASIC5.1□□□□□ -1.59
MRE11P49959 AC104010.1-201ENST00000616889 150 ntBASIC5.1□□□□□ -1.59
MRE11P49959 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
MRE11P49959 AC019278.1-201ENST00000623516 479 ntBASIC5.1□□□□□ -1.59
MRE11P49959 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
MRE11P49959 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.1□□□□□ -1.59
MRE11P49959 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
MRE11P49959 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
MRE11P49959 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
MRE11P49959 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
MRE11P49959 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.09□□□□□ -1.59
MRE11P49959 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
MRE11P49959 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
MRE11P49959 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
MRE11P49959 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
MRE11P49959 AC008033.1-201ENST00000216407 1162 ntBASIC5.09□□□□□ -1.59
MRE11P49959 RNU6-251P-201ENST00000363235 104 ntBASIC5.09□□□□□ -1.59
MRE11P49959 RNY4P14-201ENST00000363656 96 ntBASIC5.09□□□□□ -1.59
MRE11P49959 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.09□□□□□ -1.59
MRE11P49959 SNORA9-201ENST00000384215 133 ntBASIC5.09□□□□□ -1.59
MRE11P49959 MTCO3P40-201ENST00000392516 676 ntBASIC5.09□□□□□ -1.59
MRE11P49959 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.09□□□□□ -1.59
MRE11P49959 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.09□□□□□ -1.59
MRE11P49959 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.09□□□□□ -1.59
MRE11P49959 AL031663.1-201ENST00000437445 219 ntBASIC5.09□□□□□ -1.59
MRE11P49959 RPL7P28-201ENST00000437739 740 ntBASIC5.09□□□□□ -1.59
MRE11P49959 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
MRE11P49959 MTND4LP16-201ENST00000440828 295 ntBASIC5.09□□□□□ -1.59
MRE11P49959 AMD1P1-201ENST00000457220 922 ntBASIC5.09□□□□□ -1.59
MRE11P49959 MEMO1P3-201ENST00000459811 302 ntBASIC5.09□□□□□ -1.59
MRE11P49959 AC097493.1-201ENST00000463958 372 ntBASIC5.09□□□□□ -1.59
MRE11P49959 AC013828.1-201ENST00000481845 158 ntBASIC5.09□□□□□ -1.59
MRE11P49959 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
MRE11P49959 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.09□□□□□ -1.59
MRE11P49959 AC007016.1-201ENST00000512110 244 ntBASIC5.09□□□□□ -1.59
MRE11P49959 KCTD9P2-201ENST00000512203 1013 ntBASIC5.09□□□□□ -1.59
MRE11P49959 AC006499.2-201ENST00000513470 337 ntBASIC5.09□□□□□ -1.59
MRE11P49959 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.09□□□□□ -1.59
MRE11P49959 SNORA31.9-201ENST00000516429 84 ntBASIC5.09□□□□□ -1.59
MRE11P49959 SNORA20.3-201ENST00000516880 132 ntBASIC5.09□□□□□ -1.59
MRE11P49959 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.09□□□□□ -1.59
MRE11P49959 OR5AQ1P-201ENST00000527596 927 ntBASIC5.09□□□□□ -1.59
MRE11P49959 AC068587.4-201ENST00000533893 186 ntBASIC5.09□□□□□ -1.59
MRE11P49959 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.09□□□□□ -1.59
MRE11P49959 BNIP3P23-201ENST00000599655 511 ntBASIC5.09□□□□□ -1.59
MRE11P49959 DUXAP4-201ENST00000603046 613 ntBASIC5.09□□□□□ -1.59
MRE11P49959 AC078899.5-201ENST00000612475 178 ntBASIC5.09□□□□□ -1.59
MRE11P49959 Y_RNA.804-201ENST00000615262 101 ntBASIC5.09□□□□□ -1.59
MRE11P49959 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
MRE11P49959 AL359880.1-201ENST00000621879 266 ntBASIC5.09□□□□□ -1.59
MRE11P49959 AP005264.7-201ENST00000625003 745 ntBASIC5.09□□□□□ -1.59
MRE11P49959 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
MRE11P49959 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.09□□□□□ -1.59
MRE11P49959 A2MP1-204ENST00000566278 4130 ntBASIC5.09□□□□□ -1.59
MRE11P49959 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.09□□□□□ -1.6
MRE11P49959 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
MRE11P49959 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.09□□□□□ -1.6
MRE11P49959 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
MRE11P49959 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
MRE11P49959 AL079305.1-201ENST00000623159 3008 ntBASIC5.08□□□□□ -1.6
MRE11P49959 AL354685.2-201ENST00000448218 1447 ntBASIC5.08□□□□□ -1.6
MRE11P49959 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.08□□□□□ -1.6
MRE11P49959 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.08□□□□□ -1.6
MRE11P49959 AC025125.1-201ENST00000624743 1922 ntBASIC5.08□□□□□ -1.6
MRE11P49959 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms