Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.69□□□□□ -1.82
LHX1P48742 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.69□□□□□ -1.82
LHX1P48742 NCAPGP2-201ENST00000557911 754 ntBASIC3.69□□□□□ -1.82
LHX1P48742 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.69□□□□□ -1.82
LHX1P48742 AL158211.1-201ENST00000566763 763 ntBASIC3.69□□□□□ -1.82
LHX1P48742 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.69□□□□□ -1.82
LHX1P48742 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.69□□□□□ -1.82
LHX1P48742 VN1R78P-201ENST00000597393 564 ntBASIC3.69□□□□□ -1.82
LHX1P48742 AL592221.1-201ENST00000605266 382 ntBASIC3.69□□□□□ -1.82
LHX1P48742 AC006329.2-201ENST00000611491 394 ntBASIC3.69□□□□□ -1.82
LHX1P48742 AC231657.1-201ENST00000624313 397 ntBASIC3.69□□□□□ -1.82
LHX1P48742 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LHX1P48742 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LHX1P48742 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LHX1P48742 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.69□□□□□ -1.82
LHX1P48742 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.69□□□□□ -1.82
LHX1P48742 MTND5P24-201ENST00000438892 1767 ntBASIC3.68□□□□□ -1.82
LHX1P48742 HSPA8P1-201ENST00000425843 1833 ntBASIC3.68□□□□□ -1.82
LHX1P48742 SNORD46.1-201ENST00000364139 104 ntBASIC3.68□□□□□ -1.82
LHX1P48742 RNU1-33P-201ENST00000364249 162 ntBASIC3.68□□□□□ -1.82
LHX1P48742 RNU6-878P-201ENST00000384578 110 ntBASIC3.68□□□□□ -1.82
LHX1P48742 RNU6-837P-201ENST00000391056 108 ntBASIC3.68□□□□□ -1.82
LHX1P48742 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.68□□□□□ -1.82
LHX1P48742 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.68□□□□□ -1.82
LHX1P48742 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LHX1P48742 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.68□□□□□ -1.82
LHX1P48742 GLRXP1-201ENST00000423261 334 ntBASIC3.68□□□□□ -1.82
LHX1P48742 AL049610.1-201ENST00000423374 372 ntBASIC3.68□□□□□ -1.82
LHX1P48742 AC010099.3-201ENST00000423896 409 ntBASIC3.68□□□□□ -1.82
LHX1P48742 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.68□□□□□ -1.82
LHX1P48742 HMGN2P21-201ENST00000447764 270 ntBASIC3.68□□□□□ -1.82
LHX1P48742 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.68□□□□□ -1.82
LHX1P48742 MTCO3P16-201ENST00000454456 754 ntBASIC3.68□□□□□ -1.82
LHX1P48742 RPS20P32-201ENST00000456044 356 ntBASIC3.68□□□□□ -1.82
LHX1P48742 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.68□□□□□ -1.82
LHX1P48742 RPL21P10-201ENST00000463521 490 ntBASIC3.68□□□□□ -1.82
LHX1P48742 AC087312.1-201ENST00000471411 480 ntBASIC3.68□□□□□ -1.82
LHX1P48742 MTND2P14-201ENST00000482139 351 ntBASIC3.68□□□□□ -1.82
LHX1P48742 RPS3AP50-201ENST00000487064 803 ntBASIC3.68□□□□□ -1.82
LHX1P48742 TMEM251P1-201ENST00000503717 318 ntBASIC3.68□□□□□ -1.82
LHX1P48742 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.68□□□□□ -1.82
LHX1P48742 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.68□□□□□ -1.82
LHX1P48742 FCF1P8-201ENST00000510322 597 ntBASIC3.68□□□□□ -1.82
LHX1P48742 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.68□□□□□ -1.82
LHX1P48742 OR5AP1P-201ENST00000529730 940 ntBASIC3.68□□□□□ -1.82
LHX1P48742 AC023538.1-201ENST00000534576 736 ntBASIC3.68□□□□□ -1.82
LHX1P48742 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LHX1P48742 AC011611.1-201ENST00000552179 197 ntBASIC3.68□□□□□ -1.82
LHX1P48742 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.68□□□□□ -1.82
LHX1P48742 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.68□□□□□ -1.82
LHX1P48742 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.68□□□□□ -1.82
LHX1P48742 BNIP3P22-201ENST00000593399 556 ntBASIC3.68□□□□□ -1.82
LHX1P48742 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.68□□□□□ -1.82
LHX1P48742 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.68□□□□□ -1.82
LHX1P48742 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.68□□□□□ -1.82
LHX1P48742 MTND2P41-201ENST00000637599 773 ntBASIC3.68□□□□□ -1.82
LHX1P48742 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
LHX1P48742 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.68□□□□□ -1.82
LHX1P48742 AL645937.1-201ENST00000641739 1652 ntBASIC3.68□□□□□ -1.82
LHX1P48742 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LHX1P48742 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LHX1P48742 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LHX1P48742 AC073073.2-201ENST00000609827 2578 ntBASIC3.67□□□□□ -1.82
LHX1P48742 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
LHX1P48742 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.67□□□□□ -1.82
LHX1P48742 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LHX1P48742 TAS2R15P-201ENST00000390674 928 ntBASIC3.67□□□□□ -1.82
LHX1P48742 RNU6-821P-201ENST00000390995 107 ntBASIC3.67□□□□□ -1.82
LHX1P48742 U3.29-201ENST00000391296 212 ntBASIC3.67□□□□□ -1.82
LHX1P48742 AC017079.2-201ENST00000416102 485 ntBASIC3.67□□□□□ -1.82
LHX1P48742 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.67□□□□□ -1.82
LHX1P48742 AC006548.1-201ENST00000427470 102 ntBASIC3.67□□□□□ -1.82
LHX1P48742 AL357552.1-201ENST00000445254 415 ntBASIC3.67□□□□□ -1.82
LHX1P48742 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.67□□□□□ -1.82
LHX1P48742 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.67□□□□□ -1.82
LHX1P48742 RPL5P23-201ENST00000496040 868 ntBASIC3.67□□□□□ -1.82
LHX1P48742 AC021146.5-201ENST00000503544 545 ntBASIC3.67□□□□□ -1.82
LHX1P48742 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.67□□□□□ -1.82
LHX1P48742 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.67□□□□□ -1.82
LHX1P48742 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.67□□□□□ -1.82
LHX1P48742 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.67□□□□□ -1.82
LHX1P48742 SNORA3.4-201ENST00000515969 96 ntBASIC3.67□□□□□ -1.82
LHX1P48742 IGKV2-26-201ENST00000518305 343 ntBASIC3.67□□□□□ -1.82
LHX1P48742 AC105185.1-201ENST00000518705 535 ntBASIC3.67□□□□□ -1.82
LHX1P48742 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.67□□□□□ -1.82
LHX1P48742 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.67□□□□□ -1.82
LHX1P48742 AL121576.1-201ENST00000556055 276 ntBASIC3.67□□□□□ -1.82
LHX1P48742 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.67□□□□□ -1.82
LHX1P48742 SRGNP1-201ENST00000603392 451 ntBASIC3.67□□□□□ -1.82
LHX1P48742 AC103881.1-201ENST00000603476 538 ntBASIC3.67□□□□□ -1.82
LHX1P48742 AC040168.1-201ENST00000623594 991 ntBASIC3.67□□□□□ -1.82
LHX1P48742 AC004943.3-201ENST00000624116 600 ntBASIC3.67□□□□□ -1.82
LHX1P48742 CR381572.1-201ENST00000625098 102 ntBASIC3.67□□□□□ -1.82
LHX1P48742 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.67□□□□□ -1.82
LHX1P48742 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.67□□□□□ -1.82
LHX1P48742 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LHX1P48742 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
LHX1P48742 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LHX1P48742 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.66□□□□□ -1.82
LHX1P48742 AC032011.1-201ENST00000611703 1549 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms