Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.88□□□□□ -1.79
SOX2P48431 AP003385.6-201ENST00000531603 374 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.88□□□□□ -1.79
SOX2P48431 OR8L1P-201ENST00000534005 955 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.88□□□□□ -1.79
SOX2P48431 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.88□□□□□ -1.79
SOX2P48431 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.88□□□□□ -1.79
SOX2P48431 AC009117.1-201ENST00000563948 554 ntBASIC3.88□□□□□ -1.79
SOX2P48431 MIR4458-201ENST00000578872 75 ntBASIC3.88□□□□□ -1.79
SOX2P48431 MIR3667-201ENST00000581025 74 ntBASIC3.88□□□□□ -1.79
SOX2P48431 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.88□□□□□ -1.79
SOX2P48431 AC010680.3-201ENST00000604215 520 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AL139286.1-201ENST00000604465 483 ntBASIC3.88□□□□□ -1.79
SOX2P48431 OR6R2P-201ENST00000609216 300 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AL512624.1-201ENST00000613638 469 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AL590099.1-201ENST00000615276 138 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AL158196.1-201ENST00000616786 434 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AC012150.2-201ENST00000621300 544 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AP001784.1-201ENST00000624107 428 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AC091905.1-201ENST00000624400 311 ntBASIC3.88□□□□□ -1.79
SOX2P48431 AC006065.6-201ENST00000625201 545 ntBASIC3.88□□□□□ -1.79
SOX2P48431 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SOX2P48431 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SOX2P48431 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SOX2P48431 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SOX2P48431 AC011266.1-201ENST00000624119 3569 ntBASIC3.87□□□□□ -1.79
SOX2P48431 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SOX2P48431 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SOX2P48431 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
SOX2P48431 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SOX2P48431 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SOX2P48431 MIR448-201ENST00000362131 111 ntBASIC3.87□□□□□ -1.79
SOX2P48431 RNU5E-1-201ENST00000362477 120 ntBASIC3.87□□□□□ -1.79
SOX2P48431 RNU6-181P-201ENST00000363225 107 ntBASIC3.87□□□□□ -1.79
SOX2P48431 RNA5SP507-201ENST00000363603 121 ntBASIC3.87□□□□□ -1.79
SOX2P48431 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.87□□□□□ -1.79
SOX2P48431 MIR1277-201ENST00000408536 78 ntBASIC3.87□□□□□ -1.79
SOX2P48431 MIR1911-201ENST00000410783 80 ntBASIC3.87□□□□□ -1.79
SOX2P48431 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.87□□□□□ -1.79
SOX2P48431 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.87□□□□□ -1.79
SOX2P48431 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.87□□□□□ -1.79
SOX2P48431 MTCO2P11-201ENST00000431069 680 ntBASIC3.87□□□□□ -1.79
SOX2P48431 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.87□□□□□ -1.79
SOX2P48431 AC069285.2-201ENST00000440210 275 ntBASIC3.87□□□□□ -1.79
SOX2P48431 AC132479.1-201ENST00000449160 144 ntBASIC3.87□□□□□ -1.79
SOX2P48431 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.87□□□□□ -1.79
SOX2P48431 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.87□□□□□ -1.79
SOX2P48431 MTND1P12-201ENST00000455231 147 ntBASIC3.87□□□□□ -1.79
SOX2P48431 AC027673.1-201ENST00000456245 405 ntBASIC3.87□□□□□ -1.79
SOX2P48431 SNORD121B-201ENST00000458838 81 ntBASIC3.87□□□□□ -1.79
SOX2P48431 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.87□□□□□ -1.79
SOX2P48431 ST13P14-201ENST00000474095 734 ntBASIC3.87□□□□□ -1.79
SOX2P48431 AC092989.1-201ENST00000481235 277 ntBASIC3.87□□□□□ -1.79
SOX2P48431 AL139099.1-201ENST00000497398 403 ntBASIC3.87□□□□□ -1.79
SOX2P48431 PRDX4P1-201ENST00000507189 574 ntBASIC3.87□□□□□ -1.79
SOX2P48431 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.87□□□□□ -1.79
SOX2P48431 RNU6-445P-201ENST00000516949 107 ntBASIC3.87□□□□□ -1.79
SOX2P48431 AC107934.1-201ENST00000522215 217 ntBASIC3.87□□□□□ -1.79
SOX2P48431 OR4P1P-201ENST00000530808 1136 ntBASIC3.87□□□□□ -1.79
SOX2P48431 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.87□□□□□ -1.79
SOX2P48431 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.87□□□□□ -1.79
SOX2P48431 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.87□□□□□ -1.79
SOX2P48431 BGLT3-201ENST00000564523 994 ntBASIC3.87□□□□□ -1.79
SOX2P48431 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.87□□□□□ -1.79
SOX2P48431 MIR3146-201ENST00000580367 79 ntBASIC3.87□□□□□ -1.79
SOX2P48431 AC006504.3-201ENST00000586818 523 ntBASIC3.87□□□□□ -1.79
SOX2P48431 AL512782.1-201ENST00000603093 364 ntBASIC3.87□□□□□ -1.79
SOX2P48431 AL031320.1-201ENST00000604177 357 ntBASIC3.87□□□□□ -1.79
SOX2P48431 AC020634.1-201ENST00000608701 549 ntBASIC3.87□□□□□ -1.79
SOX2P48431 AL391813.2-201ENST00000609113 322 ntBASIC3.87□□□□□ -1.79
SOX2P48431 AL031666.3-201ENST00000609320 1006 ntBASIC3.87□□□□□ -1.79
SOX2P48431 AC015813.4-201ENST00000610469 179 ntBASIC3.87□□□□□ -1.79
SOX2P48431 AC105429.2-201ENST00000610567 517 ntBASIC3.87□□□□□ -1.79
SOX2P48431 MIR3688-2-201ENST00000636963 87 ntBASIC3.87□□□□□ -1.79
SOX2P48431 AC244258.1-201ENST00000637553 1071 ntBASIC3.87□□□□□ -1.79
SOX2P48431 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.87□□□□□ -1.79
SOX2P48431 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.87□□□□□ -1.79
SOX2P48431 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.87□□□□□ -1.79
SOX2P48431 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SOX2P48431 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SOX2P48431 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.87□□□□□ -1.79
SOX2P48431 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.87□□□□□ -1.79
SOX2P48431 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SOX2P48431 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.86□□□□□ -1.79
SOX2P48431 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SOX2P48431 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
SOX2P48431 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SOX2P48431 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SOX2P48431 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SOX2P48431 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SOX2P48431 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SOX2P48431 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SOX2P48431 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SOX2P48431 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SOX2P48431 Y_RNA.256-201ENST00000364594 104 ntBASIC3.86□□□□□ -1.79
SOX2P48431 Y_RNA.453-201ENST00000384223 109 ntBASIC3.86□□□□□ -1.79
SOX2P48431 SNORA51.8-201ENST00000384234 132 ntBASIC3.86□□□□□ -1.79
SOX2P48431 RNU6-114P-201ENST00000384704 105 ntBASIC3.86□□□□□ -1.79
SOX2P48431 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SOX2P48431 RNU6-821P-201ENST00000390995 107 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms