Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 RPL23AP42-201ENST00000471152 471 ntBASIC2.96□□□□□ -1.94
COL18A1P39060 AP003467.2-201ENST00000520175 319 ntBASIC2.96□□□□□ -1.94
COL18A1P39060 AK6P1-201ENST00000540219 478 ntBASIC2.96□□□□□ -1.94
COL18A1P39060 AC135628.1-201ENST00000568867 534 ntBASIC2.96□□□□□ -1.94
COL18A1P39060 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.96□□□□□ -1.94
COL18A1P39060 AC000123.2-201ENST00000623124 461 ntBASIC2.96□□□□□ -1.94
COL18A1P39060 MIR219B-201ENST00000637023 88 ntBASIC2.96□□□□□ -1.94
COL18A1P39060 AC008432.1-201ENST00000615912 1320 ntBASIC2.96□□□□□ -1.94
COL18A1P39060 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL18A1P39060 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
COL18A1P39060 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL18A1P39060 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL18A1P39060 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.95□□□□□ -1.94
COL18A1P39060 SNORD21-201ENST00000383953 95 ntBASIC2.95□□□□□ -1.94
COL18A1P39060 RNU6-891P-201ENST00000384280 111 ntBASIC2.95□□□□□ -1.94
COL18A1P39060 RNU6-532P-201ENST00000384318 107 ntBASIC2.95□□□□□ -1.94
COL18A1P39060 SNORD88.1-201ENST00000408684 91 ntBASIC2.95□□□□□ -1.94
COL18A1P39060 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.95□□□□□ -1.94
COL18A1P39060 ARL5AP3-201ENST00000439327 386 ntBASIC2.95□□□□□ -1.94
COL18A1P39060 EXTL2P1-201ENST00000446218 416 ntBASIC2.95□□□□□ -1.94
COL18A1P39060 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.95□□□□□ -1.94
COL18A1P39060 RPL7P31-201ENST00000450192 724 ntBASIC2.95□□□□□ -1.94
COL18A1P39060 RPL5P13-201ENST00000462840 709 ntBASIC2.95□□□□□ -1.94
COL18A1P39060 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC2.95□□□□□ -1.94
COL18A1P39060 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.95□□□□□ -1.94
COL18A1P39060 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.95□□□□□ -1.94
COL18A1P39060 MIR4498-201ENST00000577599 66 ntBASIC2.95□□□□□ -1.94
COL18A1P39060 AL136964.1-201ENST00000622038 2990 ntBASIC2.95□□□□□ -1.94
COL18A1P39060 MIR6733-201ENST00000635723 61 ntBASIC2.95□□□□□ -1.94
COL18A1P39060 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL18A1P39060 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
COL18A1P39060 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL18A1P39060 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.95□□□□□ -1.94
COL18A1P39060 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.95□□□□□ -1.94
COL18A1P39060 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.95□□□□□ -1.94
COL18A1P39060 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.95□□□□□ -1.94
COL18A1P39060 RPS27P27-201ENST00000498779 255 ntBASIC2.95□□□□□ -1.94
COL18A1P39060 AC010627.1-201ENST00000503819 1294 ntBASIC2.95□□□□□ -1.94
COL18A1P39060 FAM92A1P2-202ENST00000504766 877 ntBASIC2.95□□□□□ -1.94
COL18A1P39060 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.95□□□□□ -1.94
COL18A1P39060 AC108120.2-201ENST00000512973 294 ntBASIC2.95□□□□□ -1.94
COL18A1P39060 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.95□□□□□ -1.94
COL18A1P39060 RNA5SP200-201ENST00000516360 103 ntBASIC2.95□□□□□ -1.94
COL18A1P39060 SCARNA16.3-201ENST00000516595 184 ntBASIC2.95□□□□□ -1.94
COL18A1P39060 HMGB1P41-201ENST00000520234 440 ntBASIC2.95□□□□□ -1.94
COL18A1P39060 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.95□□□□□ -1.94
COL18A1P39060 HMGB1P51-201ENST00000605166 638 ntBASIC2.95□□□□□ -1.94
COL18A1P39060 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.95□□□□□ -1.94
COL18A1P39060 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.95□□□□□ -1.94
COL18A1P39060 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL18A1P39060 AC095050.2-201ENST00000510748 1458 ntBASIC2.94□□□□□ -1.94
COL18A1P39060 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
COL18A1P39060 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
COL18A1P39060 RNU6-564P-201ENST00000410983 104 ntBASIC2.94□□□□□ -1.94
COL18A1P39060 AC048351.1-201ENST00000420064 602 ntBASIC2.94□□□□□ -1.94
COL18A1P39060 AC073464.3-201ENST00000422564 712 ntBASIC2.94□□□□□ -1.94
COL18A1P39060 AL390023.1-201ENST00000428836 262 ntBASIC2.94□□□□□ -1.94
COL18A1P39060 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.94□□□□□ -1.94
COL18A1P39060 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.94□□□□□ -1.94
COL18A1P39060 HMGB3P21-201ENST00000452483 547 ntBASIC2.94□□□□□ -1.94
COL18A1P39060 RPL23AP70-201ENST00000483361 460 ntBASIC2.94□□□□□ -1.94
COL18A1P39060 RN7SL283P-201ENST00000489055 303 ntBASIC2.94□□□□□ -1.94
COL18A1P39060 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.94□□□□□ -1.94
COL18A1P39060 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.94□□□□□ -1.94
COL18A1P39060 AC092628.2-201ENST00000622492 339 ntBASIC2.94□□□□□ -1.94
COL18A1P39060 AC067852.7-201ENST00000623270 535 ntBASIC2.94□□□□□ -1.94
COL18A1P39060 RPL23AP61-201ENST00000623642 466 ntBASIC2.94□□□□□ -1.94
COL18A1P39060 AC091152.2-201ENST00000591628 2569 ntBASIC2.94□□□□□ -1.94
COL18A1P39060 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
COL18A1P39060 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL18A1P39060 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL18A1P39060 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL18A1P39060 RNU6-666P-201ENST00000363499 107 ntBASIC2.93□□□□□ -1.94
COL18A1P39060 SNORA51.4-201ENST00000364993 124 ntBASIC2.93□□□□□ -1.94
COL18A1P39060 MIR142-201ENST00000384835 87 ntBASIC2.93□□□□□ -1.94
COL18A1P39060 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.93□□□□□ -1.94
COL18A1P39060 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.93□□□□□ -1.94
COL18A1P39060 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.93□□□□□ -1.94
COL18A1P39060 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.93□□□□□ -1.94
COL18A1P39060 EIF2S2P4-201ENST00000461070 984 ntBASIC2.93□□□□□ -1.94
COL18A1P39060 AC009452.1-201ENST00000640823 606 ntBASIC2.93□□□□□ -1.94
COL18A1P39060 FRG1BP-201ENST00000278882 761 ntBASIC2.92□□□□□ -1.94
COL18A1P39060 AL356292.1-201ENST00000283110 373 ntBASIC2.92□□□□□ -1.94
COL18A1P39060 OR5H15-201ENST00000383696 930 ntBASIC2.92□□□□□ -1.94
COL18A1P39060 MIR92A2-201ENST00000385299 75 ntBASIC2.92□□□□□ -1.94
COL18A1P39060 GSTA12P-201ENST00000402398 508 ntBASIC2.92□□□□□ -1.94
COL18A1P39060 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
COL18A1P39060 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
COL18A1P39060 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.92□□□□□ -1.94
COL18A1P39060 RNU7-27P-201ENST00000459281 62 ntBASIC2.92□□□□□ -1.94
COL18A1P39060 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.92□□□□□ -1.94
COL18A1P39060 AC021087.2-201ENST00000504656 1203 ntBASIC2.92□□□□□ -1.94
COL18A1P39060 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.92□□□□□ -1.94
COL18A1P39060 AC022790.1-201ENST00000522872 204 ntBASIC2.92□□□□□ -1.94
COL18A1P39060 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.92□□□□□ -1.94
COL18A1P39060 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.92□□□□□ -1.94
COL18A1P39060 ELOCP31-201ENST00000540463 467 ntBASIC2.92□□□□□ -1.94
COL18A1P39060 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.92□□□□□ -1.94
COL18A1P39060 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.92□□□□□ -1.94
COL18A1P39060 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms