Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH3P22223 RNU6-583P-201ENST00000516012 92 ntBASIC3.65□□□□□ -1.83
CDH3P22223 PAICSP4-201ENST00000517543 1253 ntBASIC3.65□□□□□ -1.83
CDH3P22223 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH3P22223 OR5AK1P-201ENST00000524837 922 ntBASIC3.65□□□□□ -1.83
CDH3P22223 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH3P22223 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH3P22223 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.65□□□□□ -1.83
CDH3P22223 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH3P22223 OR4G1P-201ENST00000588632 938 ntBASIC3.65□□□□□ -1.83
CDH3P22223 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH3P22223 AC112220.3-201ENST00000605502 502 ntBASIC3.65□□□□□ -1.83
CDH3P22223 AC245297.2-201ENST00000610119 565 ntBASIC3.65□□□□□ -1.83
CDH3P22223 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH3P22223 AC131159.1-201ENST00000621854 213 ntBASIC3.65□□□□□ -1.83
CDH3P22223 AC039056.2-201ENST00000622261 511 ntBASIC3.65□□□□□ -1.83
CDH3P22223 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH3P22223 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH3P22223 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
CDH3P22223 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDH3P22223 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDH3P22223 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDH3P22223 MFSD8-236ENST00000641509 4050 ntBASIC3.65□□□□□ -1.83
CDH3P22223 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDH3P22223 AL390862.1-201ENST00000635467 1469 ntBASIC3.65□□□□□ -1.83
CDH3P22223 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDH3P22223 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH3P22223 ZNF37BP-203ENST00000452306 1352 ntBASIC3.64□□□□□ -1.83
CDH3P22223 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.64□□□□□ -1.83
CDH3P22223 UBE3AP2-201ENST00000429033 2259 ntBASIC3.64□□□□□ -1.83
CDH3P22223 SGO1P2-201ENST00000429458 1589 ntBASIC3.64□□□□□ -1.83
CDH3P22223 AL136164.4-201ENST00000625013 2135 ntBASIC3.64□□□□□ -1.83
CDH3P22223 AC021755.1-201ENST00000559747 1447 ntBASIC3.64□□□□□ -1.83
CDH3P22223 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CDH3P22223 U8.11-201ENST00000384699 133 ntBASIC3.64□□□□□ -1.83
CDH3P22223 U8.12-201ENST00000384701 133 ntBASIC3.64□□□□□ -1.83
CDH3P22223 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CDH3P22223 EI24P2-201ENST00000397776 1076 ntBASIC3.64□□□□□ -1.83
CDH3P22223 AL024474.1-201ENST00000404655 591 ntBASIC3.64□□□□□ -1.83
CDH3P22223 AL138880.1-201ENST00000405824 642 ntBASIC3.64□□□□□ -1.83
CDH3P22223 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH3P22223 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH3P22223 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH3P22223 AC011233.1-201ENST00000422812 283 ntBASIC3.64□□□□□ -1.83
CDH3P22223 AC005517.2-201ENST00000424673 553 ntBASIC3.64□□□□□ -1.83
CDH3P22223 AL035410.1-201ENST00000427409 427 ntBASIC3.64□□□□□ -1.83
CDH3P22223 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.64□□□□□ -1.83
CDH3P22223 NEK4P1-201ENST00000433383 879 ntBASIC3.64□□□□□ -1.83
CDH3P22223 HMGN2P20-201ENST00000437531 273 ntBASIC3.64□□□□□ -1.83
CDH3P22223 RPS29P31-201ENST00000446147 164 ntBASIC3.64□□□□□ -1.83
CDH3P22223 RPL26P28-201ENST00000451325 435 ntBASIC3.64□□□□□ -1.83
CDH3P22223 NANOGP10-201ENST00000453325 895 ntBASIC3.64□□□□□ -1.83
CDH3P22223 AL109741.2-201ENST00000455561 343 ntBASIC3.64□□□□□ -1.83
CDH3P22223 ATG12P2-201ENST00000456830 416 ntBASIC3.64□□□□□ -1.83
CDH3P22223 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.64□□□□□ -1.83
CDH3P22223 U8.18-201ENST00000459285 133 ntBASIC3.64□□□□□ -1.83
CDH3P22223 AL133162.1-201ENST00000463228 453 ntBASIC3.64□□□□□ -1.83
CDH3P22223 PABPC1P3-201ENST00000469174 459 ntBASIC3.64□□□□□ -1.83
CDH3P22223 RPS15AP17-201ENST00000470598 390 ntBASIC3.64□□□□□ -1.83
CDH3P22223 AC147055.4-201ENST00000504399 745 ntBASIC3.64□□□□□ -1.83
CDH3P22223 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH3P22223 ARL2BPP6-201ENST00000512757 439 ntBASIC3.64□□□□□ -1.83
CDH3P22223 RPL12P22-201ENST00000519073 490 ntBASIC3.64□□□□□ -1.83
CDH3P22223 IGHV3-76-201ENST00000522465 295 ntBASIC3.64□□□□□ -1.83
CDH3P22223 AP000926.4-201ENST00000527351 454 ntBASIC3.64□□□□□ -1.83
CDH3P22223 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH3P22223 MRPS36P5-201ENST00000551909 298 ntBASIC3.64□□□□□ -1.83
CDH3P22223 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.64□□□□□ -1.83
CDH3P22223 MIR4429-201ENST00000580105 73 ntBASIC3.64□□□□□ -1.83
CDH3P22223 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH3P22223 MIR4425-201ENST00000580572 84 ntBASIC3.64□□□□□ -1.83
CDH3P22223 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.64□□□□□ -1.83
CDH3P22223 MIR5187-201ENST00000583479 76 ntBASIC3.64□□□□□ -1.83
CDH3P22223 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.64□□□□□ -1.83
CDH3P22223 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH3P22223 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH3P22223 IGHV3-29-201ENST00000604817 344 ntBASIC3.64□□□□□ -1.83
CDH3P22223 AC006270.3-201ENST00000605967 1036 ntBASIC3.64□□□□□ -1.83
CDH3P22223 AL360219.1-201ENST00000610230 366 ntBASIC3.64□□□□□ -1.83
CDH3P22223 CEP170P1-201ENST00000502249 4587 ntBASIC3.64□□□□□ -1.83
CDH3P22223 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH3P22223 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH3P22223 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.64□□□□□ -1.83
CDH3P22223 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH3P22223 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH3P22223 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH3P22223 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CDH3P22223 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH3P22223 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH3P22223 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH3P22223 RAB9AP3-201ENST00000412737 573 ntBASIC3.63□□□□□ -1.83
CDH3P22223 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH3P22223 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH3P22223 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH3P22223 MTND5P25-201ENST00000430499 799 ntBASIC3.63□□□□□ -1.83
CDH3P22223 RPS6P15-201ENST00000431996 751 ntBASIC3.63□□□□□ -1.83
CDH3P22223 AL590103.1-201ENST00000434488 307 ntBASIC3.63□□□□□ -1.83
CDH3P22223 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH3P22223 AL606662.1-201ENST00000445763 553 ntBASIC3.63□□□□□ -1.83
CDH3P22223 RPL7P52-201ENST00000449200 742 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms