Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.47□□□□□ -2.01
COL5A1P20908 OR2B8P-201ENST00000432841 938 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 AC092013.1-201ENST00000438795 332 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.47□□□□□ -2.01
COL5A1P20908 HSPE1P22-201ENST00000456856 327 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.47□□□□□ -2.01
COL5A1P20908 RN7SL636P-201ENST00000497504 294 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.47□□□□□ -2.01
COL5A1P20908 AC093801.2-201ENST00000503966 1050 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.47□□□□□ -2.01
COL5A1P20908 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.47□□□□□ -2.01
COL5A1P20908 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.47□□□□□ -2.01
COL5A1P20908 AC068620.3-201ENST00000602749 560 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 AL450270.1-201ENST00000606160 391 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 AC012213.4-201ENST00000606457 354 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 AC103810.6-201ENST00000606708 136 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 AL391834.2-201ENST00000609982 546 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.47□□□□□ -2.01
COL5A1P20908 AL138955.1-201ENST00000622881 1040 ntBASIC2.47□□□□□ -2.01
COL5A1P20908 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.47□□□□□ -2.01
COL5A1P20908 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
COL5A1P20908 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
COL5A1P20908 GTF2H2B-203ENST00000508065 1432 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.46□□□□□ -2.02
COL5A1P20908 ADAM3A-203ENST00000461344 2157 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 DCAF13P3-201ENST00000561147 1334 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
COL5A1P20908 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
COL5A1P20908 SNORA51.4-201ENST00000364993 124 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 RNA5SP129-201ENST00000410276 118 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 AL354692.1-201ENST00000423044 315 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 NANOGP5-201ENST00000424456 877 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 USP9YP7-201ENST00000436723 430 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 AL138787.1-202ENST00000437804 898 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 AL158053.1-201ENST00000441503 453 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.46□□□□□ -2.02
COL5A1P20908 XKRY2-201ENST00000442362 1093 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 AL353705.4-201ENST00000449661 238 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 USP9YP32-201ENST00000452432 430 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 CFTRP1-201ENST00000456646 183 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 HMGN2P23-201ENST00000456759 269 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 AC126182.1-201ENST00000478134 357 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 RPL36AP21-201ENST00000490372 323 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.46□□□□□ -2.02
COL5A1P20908 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.46□□□□□ -2.02
COL5A1P20908 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.46□□□□□ -2.02
COL5A1P20908 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.46□□□□□ -2.02
COL5A1P20908 AP000857.1-201ENST00000532151 543 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.46□□□□□ -2.02
COL5A1P20908 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC2.46□□□□□ -2.02
COL5A1P20908 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.46□□□□□ -2.02
COL5A1P20908 AP001004.1-201ENST00000582468 324 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.46□□□□□ -2.02
COL5A1P20908 BNIP3P40-201ENST00000596017 556 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 BNIP3P31-201ENST00000604515 566 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 AC007938.3-201ENST00000604965 623 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
COL5A1P20908 AC104763.3-201ENST00000613765 618 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
COL5A1P20908 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.46□□□□□ -2.02
COL5A1P20908 MTCO1P4-201ENST00000520516 1409 ntBASIC2.46□□□□□ -2.02
COL5A1P20908 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.46□□□□□ -2.02
COL5A1P20908 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
COL5A1P20908 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
COL5A1P20908 XPOTP1-201ENST00000443317 2398 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 SNORD51.1-201ENST00000365405 77 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 RNU6-925P-201ENST00000384629 104 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 CCNB2P1-201ENST00000399411 1150 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 GSTA12P-201ENST00000402398 508 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 RNU4-53P-201ENST00000410828 140 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.45□□□□□ -2.02
COL5A1P20908 AC007390.1-201ENST00000415722 356 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 AC099336.2-201ENST00000422457 254 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 AL691517.1-201ENST00000440833 1235 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 MRPL50P4-201ENST00000446432 475 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 HMGB1P15-201ENST00000453854 435 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.45□□□□□ -2.02
COL5A1P20908 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.45□□□□□ -2.02
COL5A1P20908 AC092436.1-201ENST00000506450 503 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 FABP5P6-201ENST00000510588 409 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.45□□□□□ -2.02
COL5A1P20908 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.45□□□□□ -2.02
COL5A1P20908 RNA5SP445-201ENST00000515889 115 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.45□□□□□ -2.02
COL5A1P20908 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
COL5A1P20908 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.45□□□□□ -2.02
COL5A1P20908 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.45□□□□□ -2.02
COL5A1P20908 AC025260.1-201ENST00000548858 430 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 AC009063.1-201ENST00000563342 702 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 MTCO3P13-201ENST00000577757 781 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 SNORD39.2-201ENST00000579995 76 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 HMGB1P51-201ENST00000605166 638 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 AC073111.2-201ENST00000605657 1075 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 AL135786.2-201ENST00000608422 615 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.45□□□□□ -2.02
COL5A1P20908 AC112503.2-201ENST00000609005 552 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 AC110792.4-201ENST00000609843 298 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 AC023510.2-201ENST00000622162 746 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.45□□□□□ -2.02
COL5A1P20908 AC026634.1-201ENST00000634369 198 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms