Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXD8P13378 BX323845.1-201ENST00000432417 179 ntBASIC5.7□□□□□ -1.5
HOXD8P13378 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXD8P13378 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXD8P13378 RPL21P89-201ENST00000444021 467 ntBASIC5.7□□□□□ -1.5
HOXD8P13378 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXD8P13378 AL354714.3-201ENST00000447284 493 ntBASIC5.7□□□□□ -1.5
HOXD8P13378 AL354710.1-201ENST00000453641 246 ntBASIC5.7□□□□□ -1.5
HOXD8P13378 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.7□□□□□ -1.5
HOXD8P13378 RPL21P6-201ENST00000479171 504 ntBASIC5.7□□□□□ -1.5
HOXD8P13378 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
HOXD8P13378 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXD8P13378 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXD8P13378 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXD8P13378 AC136777.2-201ENST00000522979 358 ntBASIC5.7□□□□□ -1.5
HOXD8P13378 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXD8P13378 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXD8P13378 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXD8P13378 TVP23CP2-201ENST00000571473 623 ntBASIC5.7□□□□□ -1.5
HOXD8P13378 PISRT1.1-201ENST00000616930 107 ntBASIC5.7□□□□□ -1.5
HOXD8P13378 AC025034.2-201ENST00000623264 286 ntBASIC5.7□□□□□ -1.5
HOXD8P13378 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXD8P13378 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
HOXD8P13378 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HOXD8P13378 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXD8P13378 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HOXD8P13378 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXD8P13378 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HOXD8P13378 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HOXD8P13378 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXD8P13378 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXD8P13378 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXD8P13378 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HOXD8P13378 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXD8P13378 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXD8P13378 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXD8P13378 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXD8P13378 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXD8P13378 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXD8P13378 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXD8P13378 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXD8P13378 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HOXD8P13378 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXD8P13378 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HOXD8P13378 SNORA48.4-201ENST00000391089 134 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 EIF4E2P1-201ENST00000393781 255 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 SOD2P1-201ENST00000396543 562 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 AL136372.1-201ENST00000403060 228 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 AL139397.2-201ENST00000404529 772 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 AL354868.1-201ENST00000417077 482 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 RPL7AP49-201ENST00000429522 581 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 AL591438.1-201ENST00000433508 581 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 AC020550.1-201ENST00000447385 163 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 RPL7P43-201ENST00000478876 753 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 HMGB1P30-201ENST00000492455 606 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 MRPS33P2-201ENST00000507850 322 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 RPS27AP18-201ENST00000515536 459 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 AC023442.1-201ENST00000531247 422 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 AL137161.1-201ENST00000532231 390 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXD8P13378 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.69□□□□□ -1.5
HOXD8P13378 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXD8P13378 MIR4697-201ENST00000582977 78 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 MIR3672-201ENST00000584290 82 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 AC006157.1-201ENST00000611750 366 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 uc_338.18-201ENST00000615451 175 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 AC007485.1-201ENST00000616755 206 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.69□□□□□ -1.5
HOXD8P13378 CDC27P3-201ENST00000635418 1910 ntBASIC5.69□□□□□ -1.5
HOXD8P13378 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXD8P13378 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HOXD8P13378 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXD8P13378 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXD8P13378 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXD8P13378 AC121333.1-201ENST00000567488 2709 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXD8P13378 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
HOXD8P13378 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXD8P13378 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXD8P13378 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
HOXD8P13378 SNORA63.7-201ENST00000365579 123 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 SNORA66-201ENST00000384792 133 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HOXD8P13378 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HOXD8P13378 Y_RNA.646-201ENST00000410980 101 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 POLHP1-201ENST00000411806 470 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 AC009965.2-201ENST00000425328 970 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXD8P13378 AC009238.2-201ENST00000431026 355 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXD8P13378 AC092162.1-201ENST00000432828 434 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 AP000936.3-201ENST00000438127 255 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 RPL23AP89-201ENST00000439324 255 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXD8P13378 IGHV5-78-201ENST00000450948 295 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 AL583843.1-201ENST00000456070 346 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms