Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 TAAR7P-201ENST00000436141 242 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 FTH1P1-201ENST00000437933 532 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 AC004938.1-201ENST00000438468 308 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.84□□□□□ -1.63
COL6A2P12110 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.84□□□□□ -1.63
COL6A2P12110 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.84□□□□□ -1.63
COL6A2P12110 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.84□□□□□ -1.63
COL6A2P12110 AC108059.3-201ENST00000456388 214 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 GMFBP1-201ENST00000467831 427 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 RPS4XP1-201ENST00000482189 787 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 AC233702.1-201ENST00000482905 502 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 RPS3AP50-201ENST00000487064 803 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 RPL32P9-201ENST00000487963 407 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL6A2P12110 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL6A2P12110 Y_RNA.675-201ENST00000516389 149 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 RNA5SP43-201ENST00000516559 110 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 RN7SKP82-201ENST00000516786 223 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 Y_RNA.701-201ENST00000516812 110 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.84□□□□□ -1.63
COL6A2P12110 AC011979.2-201ENST00000527568 352 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL6A2P12110 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.84□□□□□ -1.63
COL6A2P12110 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.84□□□□□ -1.63
COL6A2P12110 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.84□□□□□ -1.63
COL6A2P12110 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.84□□□□□ -1.63
COL6A2P12110 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.84□□□□□ -1.63
COL6A2P12110 AC037471.2-201ENST00000564941 598 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 MIR1269B-201ENST00000580405 75 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 MIR4795-201ENST00000584182 89 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.84□□□□□ -1.63
COL6A2P12110 OR7E18P-201ENST00000592589 702 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 AC005034.5-201ENST00000604219 466 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 AC126915.2-201ENST00000610957 190 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.84□□□□□ -1.63
COL6A2P12110 AL442067.2-201ENST00000614033 363 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.84□□□□□ -1.63
COL6A2P12110 AL353662.3-201ENST00000625131 237 ntBASIC4.84□□□□□ -1.63
COL6A2P12110 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.84□□□□□ -1.63
COL6A2P12110 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
COL6A2P12110 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.84□□□□□ -1.64
COL6A2P12110 THAP12P4-201ENST00000528321 2266 ntBASIC4.84□□□□□ -1.64
COL6A2P12110 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.84□□□□□ -1.64
COL6A2P12110 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
COL6A2P12110 SALL4P2-201ENST00000423288 2910 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL6A2P12110 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL6A2P12110 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.83□□□□□ -1.64
COL6A2P12110 AC068254.2-201ENST00000623938 3577 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
COL6A2P12110 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL6A2P12110 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL6A2P12110 RNU1-94P-201ENST00000362627 173 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 RNU4-79P-201ENST00000362764 141 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 RNU1-83P-201ENST00000363426 164 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 U3.11-201ENST00000364476 212 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 RNU6-996P-201ENST00000365438 107 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 RNU6-171P-201ENST00000384354 107 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
COL6A2P12110 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL6A2P12110 MIR937-201ENST00000401271 86 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 RNA5SP345-201ENST00000410646 108 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.83□□□□□ -1.64
COL6A2P12110 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.83□□□□□ -1.64
COL6A2P12110 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.83□□□□□ -1.64
COL6A2P12110 AL451139.1-201ENST00000434718 346 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 RAC1P7-201ENST00000445367 377 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL6A2P12110 AL049714.1-201ENST00000466686 347 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 RN7SL222P-201ENST00000476452 299 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 AC078785.3-201ENST00000476607 425 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 SNRPCP2-201ENST00000504370 475 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.83□□□□□ -1.64
COL6A2P12110 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.83□□□□□ -1.64
COL6A2P12110 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.83□□□□□ -1.64
COL6A2P12110 AC022882.1-201ENST00000532142 501 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 AC243972.3-201ENST00000539655 198 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.83□□□□□ -1.64
COL6A2P12110 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.83□□□□□ -1.64
COL6A2P12110 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL6A2P12110 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.83□□□□□ -1.64
COL6A2P12110 HNRNPCP4-201ENST00000571636 900 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 COX6CP3-201ENST00000580869 223 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 MIR4512-201ENST00000583257 77 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 AC010525.2-201ENST00000590920 195 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.83□□□□□ -1.64
COL6A2P12110 IMMP1LP3-201ENST00000604197 224 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 AL512329.2-201ENST00000607350 548 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 AL023881.1-201ENST00000621088 301 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 FRG1KP-201ENST00000623592 341 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 AC112204.3-201ENST00000623822 332 ntBASIC4.83□□□□□ -1.64
COL6A2P12110 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.83□□□□□ -1.64
COL6A2P12110 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.83□□□□□ -1.64
COL6A2P12110 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.83□□□□□ -1.64
COL6A2P12110 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
COL6A2P12110 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
COL6A2P12110 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms