Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTNND1O60716 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTNND1O60716 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.75□□□□□ -1.65
CTNND1O60716 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTNND1O60716 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTNND1O60716 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.75□□□□□ -1.65
CTNND1O60716 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
CTNND1O60716 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CTNND1O60716 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTNND1O60716 MTND5P3-201ENST00000438536 1800 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.74□□□□□ -1.65
CTNND1O60716 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
CTNND1O60716 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CTNND1O60716 AC092447.10-201ENST00000620607 1652 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTNND1O60716 MIR448-201ENST00000362131 111 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 Y_RNA.194-201ENST00000363985 102 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 SNORD51-201ENST00000384320 80 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 MIR124-3-201ENST00000384866 87 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.74□□□□□ -1.65
CTNND1O60716 RWDD4P2-201ENST00000426392 563 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.74□□□□□ -1.65
CTNND1O60716 AC109583.1-201ENST00000432156 268 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 AC069285.2-201ENST00000440210 275 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.74□□□□□ -1.65
CTNND1O60716 snoU13.8-201ENST00000458890 104 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 snoU109.4-201ENST00000458953 143 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 AC034222.1-201ENST00000494052 532 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CTNND1O60716 MTCO3P7-201ENST00000510008 774 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.74□□□□□ -1.65
CTNND1O60716 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.74□□□□□ -1.65
CTNND1O60716 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.74□□□□□ -1.65
CTNND1O60716 OR4P1P-201ENST00000530808 1136 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.74□□□□□ -1.65
CTNND1O60716 EEF1B2P4-201ENST00000551398 348 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
CTNND1O60716 RPL23AP87-202ENST00000573039 466 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.74□□□□□ -1.65
CTNND1O60716 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.74□□□□□ -1.65
CTNND1O60716 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.74□□□□□ -1.65
CTNND1O60716 OR6R2P-201ENST00000609216 300 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 AC006065.5-201ENST00000623427 349 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 AP005264.7-201ENST00000625003 745 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 Z82217.1-201ENST00000625157 8149 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTNND1O60716 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CTNND1O60716 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.74□□□□□ -1.65
CTNND1O60716 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CTNND1O60716 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTNND1O60716 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTNND1O60716 AL049780.3-201ENST00000624612 1583 ntBASIC4.74□□□□□ -1.65
CTNND1O60716 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.74□□□□□ -1.65
CTNND1O60716 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CTNND1O60716 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTNND1O60716 DCAF13P1-201ENST00000495256 1330 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTNND1O60716 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.73□□□□□ -1.65
CTNND1O60716 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTNND1O60716 RNA5SP52-201ENST00000362448 134 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 RNA5SP258-201ENST00000362750 119 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 MIR30B-201ENST00000384850 88 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 AL356421.1-201ENST00000403255 413 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 AC127526.1-201ENST00000417526 366 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTNND1O60716 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.73□□□□□ -1.65
CTNND1O60716 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.73□□□□□ -1.65
CTNND1O60716 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.73□□□□□ -1.65
CTNND1O60716 RPL7P36-201ENST00000444633 681 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 GDI2P2-201ENST00000445131 608 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.73□□□□□ -1.65
CTNND1O60716 ACTR3P3-201ENST00000480448 893 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 AF131216.2-201ENST00000512316 564 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 Y_RNA.655-201ENST00000515919 96 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 RNA5SP154-201ENST00000516193 111 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 RNU7-143P-201ENST00000516781 65 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 AC008694.2-201ENST00000517591 306 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.73□□□□□ -1.65
CTNND1O60716 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.73□□□□□ -1.65
CTNND1O60716 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.73□□□□□ -1.65
CTNND1O60716 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.73□□□□□ -1.65
CTNND1O60716 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.73□□□□□ -1.65
CTNND1O60716 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.73□□□□□ -1.65
CTNND1O60716 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.73□□□□□ -1.65
CTNND1O60716 AC012417.1-201ENST00000582307 1039 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTNND1O60716 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.73□□□□□ -1.65
CTNND1O60716 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.73□□□□□ -1.65
CTNND1O60716 AC022146.1-201ENST00000595307 847 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 AC010680.3-201ENST00000604215 520 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 MIR7702-201ENST00000621931 59 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 FP236240.3-201ENST00000623061 327 ntBASIC4.73□□□□□ -1.65
CTNND1O60716 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTNND1O60716 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTNND1O60716 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTNND1O60716 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms