Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.56□□□□□ -1.84
PRKNO60260 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PRKNO60260 AC007991.1-201ENST00000522680 631 ntBASIC3.56□□□□□ -1.84
PRKNO60260 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PRKNO60260 MED28P5-201ENST00000528254 438 ntBASIC3.56□□□□□ -1.84
PRKNO60260 AC013828.2-201ENST00000532487 235 ntBASIC3.56□□□□□ -1.84
PRKNO60260 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.56□□□□□ -1.84
PRKNO60260 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.56□□□□□ -1.84
PRKNO60260 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
PRKNO60260 MIR4458-201ENST00000578872 75 ntBASIC3.56□□□□□ -1.84
PRKNO60260 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.56□□□□□ -1.84
PRKNO60260 AC012065.4-201ENST00000602445 679 ntBASIC3.56□□□□□ -1.84
PRKNO60260 AC008638.3-201ENST00000603341 463 ntBASIC3.56□□□□□ -1.84
PRKNO60260 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRKNO60260 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.56□□□□□ -1.84
PRKNO60260 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRKNO60260 AC013562.2-201ENST00000611632 603 ntBASIC3.56□□□□□ -1.84
PRKNO60260 AL121772.2-201ENST00000614331 297 ntBASIC3.56□□□□□ -1.84
PRKNO60260 AC025588.4-201ENST00000615802 908 ntBASIC3.56□□□□□ -1.84
PRKNO60260 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRKNO60260 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRKNO60260 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRKNO60260 LINC02471-203ENST00000641941 4752 ntBASIC3.56□□□□□ -1.84
PRKNO60260 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PRKNO60260 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PRKNO60260 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRKNO60260 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRKNO60260 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PRKNO60260 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.56□□□□□ -1.84
PRKNO60260 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.55□□□□□ -1.84
PRKNO60260 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
PRKNO60260 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.55□□□□□ -1.84
PRKNO60260 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRKNO60260 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PRKNO60260 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PRKNO60260 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRKNO60260 GDI2P1-201ENST00000429312 1336 ntBASIC3.55□□□□□ -1.84
PRKNO60260 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRKNO60260 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRKNO60260 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PRKNO60260 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRKNO60260 RNU5F-6P-201ENST00000362979 116 ntBASIC3.55□□□□□ -1.84
PRKNO60260 Y_RNA.359-201ENST00000365498 102 ntBASIC3.55□□□□□ -1.84
PRKNO60260 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
PRKNO60260 MIR3074-201ENST00000384885 81 ntBASIC3.55□□□□□ -1.84
PRKNO60260 RNU6-952P-201ENST00000391164 108 ntBASIC3.55□□□□□ -1.84
PRKNO60260 RPL7P60-201ENST00000397636 735 ntBASIC3.55□□□□□ -1.84
PRKNO60260 BTBD10P2-201ENST00000404779 676 ntBASIC3.55□□□□□ -1.84
PRKNO60260 MIR320C1-201ENST00000408566 88 ntBASIC3.55□□□□□ -1.84
PRKNO60260 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.55□□□□□ -1.84
PRKNO60260 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.55□□□□□ -1.84
PRKNO60260 MTCO3P41-201ENST00000414801 328 ntBASIC3.55□□□□□ -1.84
PRKNO60260 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
PRKNO60260 AL389915.1-201ENST00000422463 466 ntBASIC3.55□□□□□ -1.84
PRKNO60260 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.55□□□□□ -1.84
PRKNO60260 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.55□□□□□ -1.84
PRKNO60260 AC087650.1-201ENST00000431445 468 ntBASIC3.55□□□□□ -1.84
PRKNO60260 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.55□□□□□ -1.84
PRKNO60260 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.55□□□□□ -1.84
PRKNO60260 SNORA71B-202ENST00000439232 272 ntBASIC3.55□□□□□ -1.84
PRKNO60260 ATP5C1P1-201ENST00000441945 895 ntBASIC3.55□□□□□ -1.84
PRKNO60260 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.55□□□□□ -1.84
PRKNO60260 ST13P20-201ENST00000447996 1065 ntBASIC3.55□□□□□ -1.84
PRKNO60260 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.55□□□□□ -1.84
PRKNO60260 NANOGP10-201ENST00000453325 895 ntBASIC3.55□□□□□ -1.84
PRKNO60260 SNORA84-201ENST00000459229 133 ntBASIC3.55□□□□□ -1.84
PRKNO60260 AC010469.1-201ENST00000463864 576 ntBASIC3.55□□□□□ -1.84
PRKNO60260 AC091564.1-201ENST00000464563 479 ntBASIC3.55□□□□□ -1.84
PRKNO60260 AC087385.1-201ENST00000475062 312 ntBASIC3.55□□□□□ -1.84
PRKNO60260 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.55□□□□□ -1.84
PRKNO60260 RNF138P1-201ENST00000502765 546 ntBASIC3.55□□□□□ -1.84
PRKNO60260 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.55□□□□□ -1.84
PRKNO60260 CBX3P3-201ENST00000508108 532 ntBASIC3.55□□□□□ -1.84
PRKNO60260 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PRKNO60260 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.55□□□□□ -1.84
PRKNO60260 AP003033.1-201ENST00000527244 415 ntBASIC3.55□□□□□ -1.84
PRKNO60260 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.55□□□□□ -1.84
PRKNO60260 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.55□□□□□ -1.84
PRKNO60260 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.55□□□□□ -1.84
PRKNO60260 AC097468.3-201ENST00000607956 456 ntBASIC3.55□□□□□ -1.84
PRKNO60260 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.55□□□□□ -1.84
PRKNO60260 AC015813.4-201ENST00000610469 179 ntBASIC3.55□□□□□ -1.84
PRKNO60260 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.55□□□□□ -1.84
PRKNO60260 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.55□□□□□ -1.84
PRKNO60260 RMST_9.1-201ENST00000619945 193 ntBASIC3.55□□□□□ -1.84
PRKNO60260 AC039056.2-201ENST00000622261 511 ntBASIC3.55□□□□□ -1.84
PRKNO60260 AC084035.1-201ENST00000634543 607 ntBASIC3.55□□□□□ -1.84
PRKNO60260 FAM157B-203ENST00000639350 358 ntBASIC3.55□□□□□ -1.84
PRKNO60260 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PRKNO60260 AC006504.1-201ENST00000562493 3666 ntBASIC3.55□□□□□ -1.84
PRKNO60260 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRKNO60260 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PRKNO60260 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PRKNO60260 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.55□□□□□ -1.84
PRKNO60260 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PRKNO60260 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.54□□□□□ -1.84
PRKNO60260 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PRKNO60260 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PRKNO60260 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.54□□□□□ -1.84
PRKNO60260 OR11H5P-202ENST00000641612 1325 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms