Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.05□□□□□ -1.76
SMAD6O43541 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.05□□□□□ -1.76
SMAD6O43541 YPEL5P3-201ENST00000547227 352 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 AC091516.1-201ENST00000549191 703 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 AC022968.1-201ENST00000567372 442 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.05□□□□□ -1.76
SMAD6O43541 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.05□□□□□ -1.76
SMAD6O43541 BNIP3P33-201ENST00000598912 569 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 AL592436.1-201ENST00000605135 558 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 AL161637.1-201ENST00000622380 412 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.05□□□□□ -1.76
SMAD6O43541 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.05□□□□□ -1.76
SMAD6O43541 AC099654.14-201ENST00000638599 341 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SMAD6O43541 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SMAD6O43541 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SMAD6O43541 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SMAD6O43541 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.05□□□□□ -1.76
SMAD6O43541 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.05□□□□□ -1.76
SMAD6O43541 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SMAD6O43541 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SMAD6O43541 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
SMAD6O43541 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SMAD6O43541 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SMAD6O43541 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.04□□□□□ -1.76
SMAD6O43541 RPL21P132-201ENST00000331267 462 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 RNU5F-7P-201ENST00000363696 115 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 RN7SKP226-201ENST00000364912 300 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 RNU1-64P-201ENST00000365443 163 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.04□□□□□ -1.76
SMAD6O43541 RNU6-213P-201ENST00000384051 104 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 Y_RNA.582-201ENST00000391023 95 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 RN7SKP56-201ENST00000410513 331 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 USP9YP6-201ENST00000413550 854 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.04□□□□□ -1.76
SMAD6O43541 RPL21P32-201ENST00000419877 477 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.04□□□□□ -1.76
SMAD6O43541 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.04□□□□□ -1.76
SMAD6O43541 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.04□□□□□ -1.76
SMAD6O43541 AL365184.2-201ENST00000431139 435 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.04□□□□□ -1.76
SMAD6O43541 AC023347.2-201ENST00000433994 462 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 AC098614.3-201ENST00000438957 440 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 USP9YP34-201ENST00000453983 808 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 BX248409.1-201ENST00000455497 255 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.04□□□□□ -1.76
SMAD6O43541 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.04□□□□□ -1.76
SMAD6O43541 RPL9P32-201ENST00000464118 620 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.04□□□□□ -1.76
SMAD6O43541 TRBV8-2-201ENST00000475637 270 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 HMGB1P36-201ENST00000487709 576 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 RPL9P6-201ENST00000492764 598 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 AC111193.1-201ENST00000504097 155 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.04□□□□□ -1.76
SMAD6O43541 AC017037.1-201ENST00000508460 471 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 AC110792.2-201ENST00000510278 224 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
SMAD6O43541 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.04□□□□□ -1.76
SMAD6O43541 AC114781.4-201ENST00000513707 639 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 SNORA70.14-201ENST00000516205 110 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 RNU6-314P-201ENST00000516574 104 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 IGKV2-38-201ENST00000517443 247 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.04□□□□□ -1.76
SMAD6O43541 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.04□□□□□ -1.76
SMAD6O43541 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.04□□□□□ -1.76
SMAD6O43541 AC020914.6-201ENST00000594327 272 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 SEPT7P9-203ENST00000604116 343 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 AC104662.1-201ENST00000604448 511 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 RNA5SP108-201ENST00000605921 117 ntBASIC4.04□□□□□ -1.76
SMAD6O43541 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SMAD6O43541 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SMAD6O43541 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.04□□□□□ -1.76
SMAD6O43541 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SMAD6O43541 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SMAD6O43541 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SMAD6O43541 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SMAD6O43541 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SMAD6O43541 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SMAD6O43541 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SMAD6O43541 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SMAD6O43541 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.03□□□□□ -1.76
SMAD6O43541 Y_RNA.70-201ENST00000362886 110 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 RNU6-501P-201ENST00000364072 100 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 Y_RNA.256-201ENST00000364594 104 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 RNU6-114P-201ENST00000384704 105 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 MIR513A2-201ENST00000385249 127 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 MIR134-201ENST00000385258 73 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 RNU6-1300P-201ENST00000391046 108 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 RPL23AP47-201ENST00000408017 460 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 RNA5SP39-201ENST00000411245 120 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.03□□□□□ -1.76
SMAD6O43541 RPL36AP36-201ENST00000418616 301 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 AL109913.1-201ENST00000421173 514 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 AC093698.1-201ENST00000423843 571 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.03□□□□□ -1.76
SMAD6O43541 RPL7P2-201ENST00000427639 268 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 NPM1P34-201ENST00000428821 893 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 MTND3P21-201ENST00000433774 331 ntBASIC4.03□□□□□ -1.76
SMAD6O43541 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.03□□□□□ -1.76
SMAD6O43541 AL662791.1-201ENST00000441992 928 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms