Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MTND1P4-201ENST00000435196 415 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.35□□□□□ -1.71
PHGDHO43175 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PHGDHO43175 HLA-N-201ENST00000437516 135 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.35□□□□□ -1.71
PHGDHO43175 DNAJC19P4-201ENST00000440115 345 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.35□□□□□ -1.71
PHGDHO43175 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.35□□□□□ -1.71
PHGDHO43175 TPT1P14-201ENST00000448018 505 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 RN7SL354P-201ENST00000469282 294 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.35□□□□□ -1.71
PHGDHO43175 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.35□□□□□ -1.71
PHGDHO43175 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.35□□□□□ -1.71
PHGDHO43175 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.35□□□□□ -1.71
PHGDHO43175 AF213884.2-201ENST00000510417 903 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 MTND1P5-201ENST00000517906 940 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 AC107934.1-201ENST00000522215 217 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.35□□□□□ -1.71
PHGDHO43175 AC069240.1-201ENST00000548774 375 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.35□□□□□ -1.71
PHGDHO43175 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.35□□□□□ -1.71
PHGDHO43175 AC027807.1-201ENST00000559921 996 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.35□□□□□ -1.71
PHGDHO43175 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.35□□□□□ -1.71
PHGDHO43175 MIR3146-201ENST00000580367 79 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 COX6CP3-201ENST00000580869 223 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.35□□□□□ -1.71
PHGDHO43175 VN1R79P-201ENST00000593540 513 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 AC107304.1-201ENST00000604229 296 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 AL133173.2-201ENST00000614270 90 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.35□□□□□ -1.71
PHGDHO43175 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.35□□□□□ -1.71
PHGDHO43175 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PHGDHO43175 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PHGDHO43175 DHX40P1-201ENST00000588725 1412 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 AC068254.2-201ENST00000623938 3577 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PHGDHO43175 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
PHGDHO43175 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.35□□□□□ -1.71
PHGDHO43175 AC125257.1-201ENST00000560400 2930 ntBASIC4.35□□□□□ -1.71
PHGDHO43175 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.34□□□□□ -1.71
PHGDHO43175 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
PHGDHO43175 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PHGDHO43175 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.34□□□□□ -1.71
PHGDHO43175 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
PHGDHO43175 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PHGDHO43175 SNORD113.2-201ENST00000364166 89 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 RNY4P16-201ENST00000364768 94 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
PHGDHO43175 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.34□□□□□ -1.71
PHGDHO43175 MIR19A-201ENST00000384878 82 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 MIR93-201ENST00000385024 80 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PHGDHO43175 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PHGDHO43175 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PHGDHO43175 HMGN1P24-201ENST00000412282 298 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.34□□□□□ -1.71
PHGDHO43175 CCDC58P2-201ENST00000417131 366 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.34□□□□□ -1.71
PHGDHO43175 BEND7P1-201ENST00000422058 457 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 MTCO3P30-201ENST00000426425 670 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.34□□□□□ -1.71
PHGDHO43175 USP9YP15-201ENST00000442391 422 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.34□□□□□ -1.71
PHGDHO43175 ABCF2P2-201ENST00000450549 296 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 FGF7P3-201ENST00000454645 303 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 UBDP1-202ENST00000457888 382 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.34□□□□□ -1.71
PHGDHO43175 RBM43P1-201ENST00000476891 1081 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 AC025445.1-201ENST00000502728 300 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 KCTD9P5-201ENST00000504141 1170 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 AC010587.1-201ENST00000505809 469 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.34□□□□□ -1.71
PHGDHO43175 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.34□□□□□ -1.71
PHGDHO43175 AC103783.1-201ENST00000520506 373 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.34□□□□□ -1.71
PHGDHO43175 DEFB108A-201ENST00000530110 222 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.34□□□□□ -1.71
PHGDHO43175 AL121603.1-201ENST00000553815 142 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.34□□□□□ -1.71
PHGDHO43175 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.34□□□□□ -1.71
PHGDHO43175 RN7SL690P-201ENST00000582087 240 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 AP003465.2-201ENST00000602571 373 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 XIAPP1-201ENST00000603162 600 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 AC008638.3-201ENST00000603341 463 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 AC245014.2-201ENST00000603689 287 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 AL022154.1-201ENST00000604698 785 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 AC246785.4-201ENST00000605374 287 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 AC007038.2-201ENST00000608095 740 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 AL161734.1-201ENST00000609720 557 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 AC009268.2-201ENST00000621925 457 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.34□□□□□ -1.71
PHGDHO43175 AL049536.1-201ENST00000625043 744 ntBASIC4.34□□□□□ -1.71
PHGDHO43175 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PHGDHO43175 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PHGDHO43175 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.34□□□□□ -1.71
PHGDHO43175 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.34□□□□□ -1.71
PHGDHO43175 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
PHGDHO43175 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms